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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mtt-PC
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVRRANAT GSFSWIGSDG WSARNLVSDD YEPEVEGTLS VQPQANPVRG FEEYFLSLTV  60
   61 ENNQRNPWFV EFWEDHFQCR YPGSTSTPYN NYTKQCTTKE RLSRQNTDFE DQLQFVSDAV 120
  121 MAFAYALRDM HRDLCGGGPS LCEAMKPTKG ADLLKYLRKV EFEGLSGDEF RFDGNGDGPA 180
  181 RYNIIHFKQS QAGQYHWVKV GEYTEGELRL NMTEVKFKRL SPKPPESVCS LPCLVGQAKK 240
  241 YVEGESCCWH CFNCTTYQIR HPDDETHCKL CKLGTLPDAH KQYCRPIPEI YLRPESAWAI 300
  301 GAMAFSATGI LVTLFVMGVF VRHNDTPIVR ASGRELSYIL LAGIFMCYGV TFALVLKPTN 360
  361 IVCAIQRFGV GFCFTVVYAA LLTKTNRIAR IFKAGKQSAK RPSFISPKSQ LVICACLVSV 420
  421 QILINGVWMV IAPSHAMHHY PTREDNLLVC DSYIDASYMI AFSYPIFLIV ICTVYAVLTR 480
  481 KIPEAFNESK HIGFTMYTTC VIWLAFVPLY FGTANHVPLR ITSMSVTISL SASVTIACLF 540
  541 SPKLYIILIR PERNVRQSMM PPRYGNMHRT AGTGPSSMMA AAVVTAATCA QEEKIQKHIT 600
  601 PTNTENSLKT KKLCEMATQT ISSIITSLDI NAYNQIPYAD QYVPNNATTA TTTPTDKGSG 660
  661 NGNSNSNSNT NGSSNSNSNS NGDGDVATEQ VVANNNKINQ RQHGQPAVAF AITSTNNHIS 720
  721 GPAATITTTA ATGETTTEAL VATITTPLAT VDGSETMSVA PNNGHGNNGS QRPPVLQTNL 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle