YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14767-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIHLKMGP QRNQLHSNNN NGAAGSSSST GNRHLKEFTC CFGLHVHTAT LMIGLWHLFL  60
   61 NILALSVLAV IWRNPEMMDE LEGGTHDYTV DLSAPALPTP LSKVEPPYAY RDHSLNYQNF 120
  121 DMGGLVCTCM IAITLMMIYG TIKGKPSHLL PFFCLQLFDF AITTLTAAGY LCYLQAIHSI 180
  181 IAESHRLPWR EKLLELPPEE LVVVVLVVFI CIVFLKAYCI GIVWRCYKYL TLRQQHVRTL 240
  241 FPFLEPPTGV HSVGGTFGAE ERSYSTLLPN YDEAIAQYLK QAPPPSYQVA MSNYEEGEDA 300
  301 AVGGAEVNPS VAPLFVALGA ATTANVASNT DDNMDNNNDQ PNNNNTMHVN ANTPPMRRSD 360
  361 AAVNANVDEE ADDLEVIDAG VDVIGGIPPP PPYNDVADAQ VQVPSQSPLH RQPNIPGQVF 420
  421 GGRDESQA

Type	Start	End	Confidence
Cytoplasmic	1	52	0.83
Transmembrane Helix	53	72	0.85
Non-Cytoplasmic	73	121	0.87
Transmembrane Helix	122	142	0.93
Cytoplasmic	143	151	0.78
Transmembrane Helix	152	174	0.82
Non-Cytoplasmic	175	201	0.79
Transmembrane Helix	202	224	0.89
Cytoplasmic	225	428	0.78