YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33474-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFINEIGE LLDSCRAREV LMEVLCQSAQ LVIGYQINQS PDLNNVGSED SGEPPVLRYT  60
   61 VDSELHDYEP DRITALLTVM SNTVDLLFYP VDTICWLASH KVFDVKKQKT WRFVNSLLSM 120
  121 VSAYLNVVRI SRIFLQDGYK LSHFDVVSLA HFLFDLLHNI CSLPRSYLWG MKHSSLYLGV 180
  181 IGTVSAGLGI CQILTKRRLT K

Type	Start	End	Confidence
Cytoplasmic	1	112	0.87
Transmembrane Helix	113	133	0.60
Non-Cytoplasmic	134	174	0.73
Transmembrane Helix	175	195	0.92
Cytoplasmic	196	201	0.87