YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syx6-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDKMSLNRS RDRDITAHQP LLDNDRHSPN HNHSIAIPNS NSNSNEYHQH PHNDRTYLVE  60
   61 CPNGNSLINS GSQVANTIAG TMSAAAAAAS RHSGTKYSKL ENALDSPSHY GQTHHGGMDS 120
  121 PSHRYVGETV SIQQRMIQGQ DEQLDMISDS IGTLKTVSRQ IGVELDEQAV MLDDFGNEFD 180
  181 TTESKLDTTM KKVAKVLHMN NDKRQWAAIL ILSGLLLFVI ILFIIL

Type	Start	End	Confidence
Cytoplasmic	1	205	0.86
Transmembrane Helix	206	225	0.97
Non-Cytoplasmic	226	226	0.88