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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45446662, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIESRSTST ASETTKTAIK STTSSKSPVT FGNLGEKRRA EQLFRCACAN FNLLLLTLML  60
   61 GFGKCCTATP TPLNTPSTNT PTSAVSPHNP QTLDESGSLS KVIDGKAFIN MGFKFLNVSG 120
  121 KIGTPLGIGQ SLEAKCDEKQ FQCHSGDCIP IRFVCDGDAD CKDHSDEQIK ECKFIEATCS 180
  181 SDQFRCGNGN CIPNKWRCDQ ESDCADGSDE ANELCRARTC SPDEYACKSG EGQCVPLAWM 240
  241 CDQSKDCSDG SDEHNCNQTC RADEFTCGNG RCIQKRWKCD HDDDCGDGSD EKECPVVPCD 300
  301 SVAEHTCTNG ACIAKRWVCD GDPDCSDGSD ERSCANVTKT TTPCLSHEYQ CKDRITCLHH 360
  361 SWLCDGDRDC PDGDDEHTAN CKNVTCRADQ FQCGDRSCIP GHLTCNGDKD CADGSDERDC 420
  421 GLSLSLGINQ GGCNATSEFD CGGGQCVPLS KVCDKRKDCP DGEDEPAGKC GINECASKNG 480
  481 GCMHQCIDLK VGHHCECHEG YKLSPDKRNC QDINECEVPG KCSQICVNEI GGFKCECEAG 540
  541 YMRDPKNHTR CKASEGHASL LLARRHDIRK IALDHMEMTS IVNSTKAATA LDFVFRTGMI 600
  601 FWSDVTTQSI YKAPIDEGNE KTVVLTKSSV TSDGLAVDWI YNHVYFTDTH KCTIELTNFE 660
  661 GSMGKVLVKD SLDIPRSIAL DPIEGWMYWS DWGASPRIER AGMDGSHRTT IISYDVKWPN 720
  721 GITLDLVKKR IYWVDGKLNV ISSANYDGSQ RSQVLYSGEY LRHPFSITTF EDNVYWTDWD 780
  781 KQAVFKANKF TGEDVEPVTA MHMLQHPMVV HVYHPYRQPD GVNHCQSVNG HCSHLCLPAP 840
  841 RINERSPRIS CACPTGLKLM VDGLMCVEDL TRPPRARKTK PRPKSPRRRL PTGVQVGHAD 900
  901 IRIEINDDLQ LSTRLPLLPT TFVADQRPVK NHTQIEKTTT PSEQPDSGFI ALVVIASLSG 960
  961 FAVLLSVLLL IGYRYCSKRR INSMNFENPI YRKTTTTEDH FSLRKNLPAR IYDHTSVMDE1020
 1021 EYSPVIGISS Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle