YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG18528-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLRNASQS FLGSFRRFAS SGCTIYSLSS GHVKCGVSVI RVSGPQTKKA LRAIVANKEY  60
   61 EPKARQAYLK SFYHPASKEM IDRGLLLWFP GPASFTGEDS CEFQVHGSLA VIAAMLDALG 120
  121 KVDGLRPAEP GEFTKRAFFG GKLDLTEVEG LADLIHAETE AQRKQALLQS TGALARLYDN 180
  181 WRRRLIRCAA HLEAYIDFAE EEQIEGGIIL QLGKELKAVK REIREHLSDQ RQGELLRDGV 240
  241 RTVIIGAPNV GKSSLLNLLC QRSVSIVTDQ AGTTRDIIET MHNFGGYPVV FSDTAGLRRY 300
  301 TTDSIEQEGM QRAKNCLVQS DLILLLAEAK NIAQLTHDDA VAPFVDSYLG ELDIPLDMCS 360
  361 GKRLQLVANK TDTLTDEEHQ QLDKLSNVLA ISCHKPDKMP VFLGSLEKQL QELCGEPRAE 420
  421 NPRITNTRYR QQLERCIENI DIFLRDYRPD VYPDMAIAAS KLRNSVRCIE RITGHISCED 480
  481 ILDVVFKDFC IGK

Type	Start	End	Confidence
Signal Peptide	1	31	0.60
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	493	0.99