YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ETHR-PA, FBpp0308331
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPQIPSYIR TTAMFFCIVI MLLGVVGNVM VPIVIVKTKD MRNSTNIFLT NLSIADLLVL  60
   61 LVCTPTVLVE VNTRPETWVL GHEMCKAVPF VELTVAHASV LTILAISFER YYAICEPLKA 120
  121 GYVCTKGRAI LICVLAWGIA ALFTSPILWV AEYKLAEYID GSSVAVCLTQ AISDWTLAFF 180
  181 LMTISVFFVV PFVTLVVLYG IIARNLVSNR AAMLRARPTK PELSLKARKQ VVLMLGAVVL 240
  241 SFFVCLLPFR VLTLWIILST DQTLHDLGLV RYYSLLYFCR IMLYLNSAMN PILYNLMSTK 300
  301 FRRGFKRLCQ DAGRLLLELV TLGRRKEDSS RGRRGTLSLG MGTNTNTNTN SSNATGATSS 360
  361 SILSRSSNRR CSEDISRTRL KIEMQMPCGS DLEAMAMLQH STLGKGIARR VSDSRLMPLR 420
  421 NHQPRRHKPQ ISFDEESLEE NKRSEAKIPT KCREKLPGIA REIVNLTENT L

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.84
Transmembrane Helix	12	36	0.89
Cytoplasmic	37	46	0.86
Transmembrane Helix	47	69	0.89
Non-Cytoplasmic	70	89	0.85
Transmembrane Helix	90	108	0.85
Cytoplasmic	109	128	0.79
Transmembrane Helix	129	150	0.91
Non-Cytoplasmic	151	178	0.93
Transmembrane Helix	179	203	0.88
Cytoplasmic	204	230	0.92
Transmembrane Helix	231	254	0.89
Non-Cytoplasmic	255	275	0.85
Transmembrane Helix	276	297	0.84
Cytoplasmic	298	471	0.92