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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Pxd-PA, Pxd-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRARDLLLL ALLGFISSAL GLKVSSGYHI VHNQPQSSFP NYHGFSYLQG SAPYVIGNSL  60
   61 PTSPAPQNPF SSPASPPVSA YGYSFPTAGR VSCAAPPAVC EKTAYRTLDG SCNHLEQPGL 120
  121 GVANSKYGRL LTPKYADGIS APTRSVTGDE LPSARLVSLV AFGEQDVPDP EFTLHNMQWG 180
  181 QIMTHDMSMQ AGGTQSKKHP TRCCTDDGRL IGLDTAHKTC FAIIVPPHDP AYSQVGTECL 240
  241 NFVRTLTDRD SNCQYQGGPA EQLTVVTSYL DLSLVYGNSI QQNSDIREFQ GGRMIVEERN 300
  301 GAKWLPLSRN VTGDCDAVDA SEVCYRSGDV RVNQNPGLAI LQTILLREHN RIADALSALN 360
  361 PHYDDRTLFQ EARKINIAQY QQISYYEWLP IFLGGENMLK NRLIYKAPSG SYINDFDPNI 420
  421 DPSVLNEHAT AAFRYFHSQI EGRLDLLSEL RQVLGSLTLS DWFNRPGIIE VGDNFDSLTR 480
  481 GHATQPEELT DINFDRQIKH FLFRRNMPFG SDLRSLDIQR NRDHGLASYN DMREFCGLRR 540
  541 AHSWEGYGDL ISPPILEKLK SLYPSHEDVD LTVGASLEAH VAGALAGPTF LCILTEQFYR 600
  601 TRVGDRFFFE NGDKLTGFTP DQLEELRKAS MARLLCDNGN HISSMQPEAF RTVSHSNPII 660
  661 PCSNIPQVDL TKWIDQKLYA TVDPSHYGKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle