YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0304506, CG3...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.96
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVSKFEASM ATNFVIYLAL GALLCLATAN GEIVNTNVER TLDLTSQLVK TTTKISAEDS  60
   61 AGKPIVEYVF FTSEPSLAYI DVKDASDKSV PFKRNEPVKG EQSFTFTFPR AAAKQTFIVE 120
  121 TVASKGIRPH PEEIRQNDKQ FVKYTGNLHL YSKYRTNSQK TNVKLSSSNI LSHTQVKPFS 180
  181 VSSNKITLGP YENVEAFSQE PLVIHYENSA PFVTVNTLER TLEISHWGNI AVQESIQMTH 240
  241 TGAKLKGSFS RYDFQKEGRS GLAALKSYKT YLPASASGVY YRDTNGNIST SNMNAVRDFI 300
  301 ELELRPRFPL FGGWKTQYTL GYNVPSYEYM FNDGNKYQLK MHLIDHIYDN MAIDEATIKI 360
  361 ILPEGSSDIR LSTPYSISRL PNELVHTYLD TIGRPVVSFS KSNLVESHIS DFTLHYSFSK 420
  421 TSMLQEPLLV SGFIYIIFLF TIVFLRLDFS ITSHAHKE

Type	Start	End	Confidence
Signal Peptide	1	31	0.96
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	427	0.99
Transmembrane Helix	428	447	0.93
Cytoplasmic	448	458	0.86