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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Oatp30B-PD
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQMTGLYSE TNSGDDSSID AALDHDSQPH ATSYLAGDQL PSTVGSGPGG GGPSAVADSV  60
   61 TVKCHSRQAS AGKCPADPEE DFDEEQFRSG DCGILNCRPY GIQRFARIKI FVVLLSLLVM 120
  121 MQQALSSGYI NSVITTIEKR FEIPSSYSGL IASSYEIGNV ITVIFVSYLG SRRHIPVWIG 180
  181 IGAVIMGIGS LVFMVPHFTG EPNPGIAIVN KTSDNICKSA LVRDQDMDLG RLSSGLSNQP 240
  241 LAPHTLREDN CLEGKASTTG PVLLFVLAQL LLGCGGSPLF TLGTTYVDDH VRTESSSMYI 300
  301 GFMYSMGAFG PVVGFLLGAY LLSFHMDSLS STTISITPGD RRWVGMWWGG FLLCGVILLV 360
  361 VAVPFFSFPK VLAREKKKIR KSSVVQPVLP NNSRATVATD EMGKVKKLEI VAVTSKEDQS 420
  421 QAPPKVDTGY GKDIKDIPQS MLRLVKNPVY IVTCLGACME LMIVSGFVVF LPKYLETQFS 480
  481 LGKSQANIFT GSIAVPGACI GIFLGGCILK RFQLKPKGAV QFVLITNVIC LACYAMLFFL 540
  541 GCDNLKMAGT TIPYYTSNKH GSTLEQPFQV NLTAACNFGC ECLTSEVEPV CGNNGLTYFS 600
  601 PCHAGCTAFS STSNTNYTNC ACVRANISSS IYRGAGGSQA QALSANENFA EVTVVPVATA 660
  661 GPCATPCRTI YPFLILLFFM TFLVASTQMP LLMIVLRSVS EEERSFALGM QFVIFRLFGY 720
  721 IPAPILFGNL IDSTCILWKS SCGEKGGRCL IYDIEKFRYK YVGLCASVKL IALVIFMVDW 780
  781 WLVRRRKQLE KMKPLNASDP IIGSIISLDK LFEEKLSGAE PSTAFVGGGG ELIIPTDILR 840
  841 HSRNDSRTMH MDYCYDKCGR VVTPANTCNQ PQTKSKKHFR SASCDVKMIK SFARDHSSSS 900
  901 GPADAAGQDA VGASTKYKNL KKFQAHTRNH STDLHDPSQP IRYIQNQLRP QDCPEEDDDE 960
  961 ELTTGCGHFV KKHSRNHSYD QIYMPNNIRF DADFLRHPHS HHNPKKNVNV LKNVVSDVGK1020
 1021 LKNSNEIEAG GAGSRGHSRN NSKDLNTKIS SATPASGQVV TDASTTGLSV LRHRRTNSKD1080
 1081 LNYQVLPESA ASSSVSGHAH PQHTRNTSHH KIQIDDDRNE LINDNDDEEE ERSACA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle