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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bchs-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVMRKLRGA ASAGSVSGSS SGTSTANNSS PGSSRTDAGA PTAANGRNAE EALMDARVQV  60
   61 SLTTLKKLFN EYTHPREPLS EQERDDKLYE MLPLFCKVFS SCPSNDMSEK FWDVVAFCQQ 120
  121 VSRLMVSEIR KRASNQSTEA ASIAIVKFLE VETTEETSSG WMLLATLNLL ANGDVSLIQV 180
  181 MTAAAVPSTL VKCLYLFFDL PIVEDDEPSA DGGAVSEFNA HERRTLLQKV FVQLLVKLCS 240
  241 YPYPAEELAR MDDLTLLFSA ITSPCPIHNI VWRKNAAEIL TTISRNGLTD AVVSYIHSKG 300
  301 CMALCVDNMQ RLTFGNPLEI VEMFVTVFCF LKDSSQVSQI LMDDFRASQG YVFLSDFLLK 360
  361 FDNNRSQSLE IQAAIRNLVL MISSLCMCGF YELRPPASQF NTAFKLQNFQ LPQATSRETC 420
  421 VRNVYAFQVL QNVFLKSTTP ALCCTILDAI SRVYHSENAN YFILESEQTL SSFAERIHMK 480
  481 SPQIQEKFYD LLEFIVFQLN FVPCKELISL SLLLKHNQST SCSILCLKTL LNILRHNAVF 540
  541 KDVYREVGIL EIFVGCLTRY AAHVQKITKG DESVVVELEN ESEEELFDTL GKHVLEALTM 600
  601 LLGGGASNNA QLFREYGGAK CVHELVKFKH CRPQALGIVR ELILSAGGDD DMLHILSLMH 660
  661 SVSPLQVEFK IQILNMLLGC LKDSHRTRTV FRKVGGFVYV TSVFVSLDGS MALPQPDIPQ 720
  721 QDLILLLQIV FQTLATAMRF EPANAKFFHQ EISSSSLCDT LRLLGCFGGS SALQDYTGTY 780
  781 EPQQSLLKYY HEIFSGDILS VSFSEDVPYP LSYVCIVFRL LYSIALDNFE APNLSGIITL 840
  841 FSDPPTTLRS PSKELAPPVH PSQLNLTQPS PEPRIVHPGV VLCMLQLLPA VEYDMAPLQA 900
  901 VQLQVYLSEI IKSLVRSERN QQIMCDHGLA EKLLKLTRRA LAEESHPLHV PMQYILERLA 960
  961 AQALQPTELR QFLRLGEPLS CADIDLQQPY KLGGPVPLTR IKTLVSMTTP RDFRAHGSST1020
 1021 LPPFVELDMS AEGFGCLYLP SLAPQATATA GGTIDANSIG GIGAGDRIFP PQTGLTYSTW1080
 1081 FCVEKFSDPK TDPHCVRLLT LVRTIHNPRE ENLACLSILL SARDKAIVVS TQETLVTPRK1140
 1141 SIGDWEPEGS DDGIARIWCP DLLHEGQWHN LVVVLNRAVL KNSSLFLYLD GVPMHTQKLH1200
 1201 YIAQHPAAGN ASLTSPTQIF GYIGTPPIWR RYSRLCWKQG VCHLIEDVLT QQTVQTIYQL1260
 1261 GPHYMGSLQA PQLGKQSESL APLVPEDRVL LGLNAKAVSK LTLVKIRKVY SRADNKSIAK1320
 1321 QLNMNSHENA TPIKILHNSA GHLAGAGRSL GGVVVGYLGV RVFSPHPVSA MIDTVGGCNV1380
 1381 LLGIIAMAQD VESLYAGVKA LTCVVRSNRA AQAEMDRKRC YQTLGMFFKK KKHLLNSHIL1440
 1441 HLTFGLVGTV NSGQDMSAIP NVTAFQDLLC DLEIWHNAPN GLLRSLLEHL LELVVESSDK1500
 1501 KQNVKIMRDL QLLVKLLHII TQIQDHSTRE ILFSLLETLL GGQPRHTDLL LFGQYVAAKL1560
 1561 PHAHSGGLER AVLLPSMKNP AEDQDGGVAQ NIYLRNRCLS LLHGLLFTPR NTVNYVICDD1620
 1621 ISKTLGMDWL LLFMQPHVHF TTVIIAVRIL VVICANESFL VRFRDATHNG GYLRFTEMVS1680
 1681 QRKMLGLGAQ QLNQRPTNGT GTVIVATPQN TIQHLPTQIA GEVRAAALNI PGFQLLEWLM1740
 1741 NHHLDVPELY FLITALIMGQ PVKVLATEHT KFDLDRVWSF LWGAPVSANT QLPKLNICPE1800
 1801 GVCVLLAMVR GIVHGGECAP WLHSHPETII QLLFSLYQNL TDFAPVMMTG DVVTSLVAVL1860
 1861 FPLASRPADS EPNSGASTPT DDTGSSFALP PPETLHGAPQ PKLTAHPVCN CIIDFLRVIV1920
 1921 VDSLGLNMQG KPTPVIDLVL DAAPESAELP LQVQYQTQII IALMDHLLAA DVLVGEQAAL1980
 1981 PLVPLLQSQM QYIAPNVFYL TARIVDKLWQ GCLARNPHDI FDFVIKLIVQ AKRRSSSLSL2040
 2041 EHLHHSLNRS ILFLLSRPTD DSRADQMSVL EALHKIIQHR LLIFGAGNHE LEFIGCLTYC2100
 2101 LLQLTADMKI ILEPATSRNT TWHVNPQTET AEPKDEDLNQ LQGRNLIVGA AFRVWEELYV2160
 2161 CKKPAIEEVF KVSLTSPPPN SKAPDLQTTR EQVMELASKL WFNYVEAERK ATYRAPWELH2220
 2221 TQIQSKIQKV TGGLSRLTSR TKTKKEELVR TRSTLTREAA YESTGIHVQL IKDLLDLRAK2280
 2281 QYQQMLQHTQ RYVYQDWVQS EMELTRERGL WGPTGSCSLD KWILDTTEGP HRMRKKTMRN2340
 2341 DVFYLHYPYR PELELADNRQ LKYKVASSLD SKTYALHGPQ QPRILAEAGE HHAMQQQSSL2400
 2401 EAVQSHRLET SSSTSTPPPM VLPKLVGHGS TPCPQESVDG NAPEDDEEEE DTSMTSDNET2460
 2461 FLRLLEEQEK ISFMFRCARV QGLDTFEGLL LFGKEHCYIV DGFTLLKNRE IRDIDTLPPG2520
 2521 AYEPIIPNSG GTSSTTSRAV SHKLRQCSKF AYEEIREVHK RRYLLQPIAL EVFSEDGRNY2580
 2581 LLSFPRKVRN KVNQRFLALA TALNDNAQQS VAGQKRTASV EQTAGIFSGL IGETSVTQRW2640
 2641 VRGEISNFQY LMHLNTLAGR SYNDLMQYPV FPWILADYDS EELDLTNPKT FRDFSRPMGA2700
 2701 QAEERLEQFQ KRFKEWDDPH GETPPYHYGT HYSSAMIVCS YLVRLEPFSQ PFLKLQGGHF2760
 2761 DLADRMFHSI KEAWLSASKL NMADVKELIP EFFYLPEFLS NFNNFDLGTK QNGETLNHVI2820
 2821 LPPWAKHDPR EFIRLHRSAL ECDYVSQHLH LWIDLIFGCK QQGPAAVDAV NVFHHLFYEG2880
 2881 NVDIYNIDDP LKKNATIGFI NNFGQIPKQL FKKAHPAKKM GGSRHSALID PTSLIQGNST2940
 2941 VLQTDRLFFH NLDNLKPSLQ PIKELKGPVG QILQPDKTVF AVEQNKVMMP PSYTKYIAWG3000
 3001 FADHSLRIGL YDTDRASFVS EASAQNSGEI LTCACPNAKM IVTAGTSSVV TIWKFDANRK3060
 3061 SLAVKHSLHG HTDAVTCLAA SAAYNVIVSG SRDGTAIVWD MTRFTFVRQL RGHAGVVAAV3120
 3121 SINELTGDIA TCSATWLHVW SINGDALAMV NTCVGSADRM QQILCVAFSQ IREWDQQNVI3180
 3181 ITGSTDGVVR MWSLEHTQVP IDRKLKRGTE VSSQDKPDTV SLEGKDNKDD KMSLMKQIKS3240
 3241 LSQSEEEMEI VKSASESSIS EASQHSHGSS KSAEAGPKAE VQGERRKSSI SGAKSLHEMK3300
 3301 SATVEGQGSS YDPKSNEDEH AIRPSKSDTS LTDGFVVIDN DRHKGDQILR KGFRWQRQLM3360
 3361 FRSKLTMHTA YDRKDNAEPA SITALTVSKD HKILYVGDAR GRIFSWSVTE QPGRGVADHW3420
 3421 LKDEGADQCV KCHVKFTLYE RKHHCRNCGQ VFCNKCSRFE SEISRLRILK PVRVCQACYS3480
 3481 QLRTNSLDN

YRC Informatics Platform - Version 3.0
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