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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S1P-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVFTFLFII SAICSLDAFK TAVVPNEFIV HFHSKYFAPV RESYIAAKLL GSNVTNWRIV  60
   61 PRLNLAWQYP SDFDILRVCD GYESSSEFII ERLQTHPSVK AVVPQRSVRR ILNYDAYSNL 120
  121 TYIHRHPQGV LRNRNPNNDR HRQLCSVLHA NILWKLGITG KGVKVAIFDT GLTKNHPHFR 180
  181 NVKERTNWTN EKSLDDRVSH GTFVAGVIAS SRECLGFAPD ADLYIFKVFT NSQVSYTSWF 240
  241 LDAFNYAIYR KINILNLSIG GPDFMDSPFV EKVLELSANN VIMISAAGND GPLYGTLNNP 300
  301 GDQSDVVGVG GIQFDDKIAK FSSRGMTTWE LPLGYGRMGL DIVTYGSQVE GSDVRKGCRR 360
  361 LSGTSVSSPV VAGAAALLIS GAFQKIDYIN PASLKQVLIE GAEKLPHYNM FEQGAGKLNL 420
  421 LKSMQLLLSY KPKITLIPAY LDFTQNYMWP YSSQPLYYGS SVAIANVTIL NGISVTSHIV 480
  481 GIPKWIPDFE NQGQFLQVSA QVSPIVWPWT GWMSVFIAVK KEGENFEGVC KGSITLVLES 540
  541 FKQTTNETHV TEVDFPLTIK VTPKPPRNKR ILWDQYHSLR YPPRYIPRDD LKVKLDPLDW 600
  601 RADHIHTNFR DMYTHLRNVG YYIDVLREPF TCFNASDYGA LLIVDPERGF GDEEINALQE 660
  661 NVYKRGLNVV VFGDWYNTTV MKKIKFFDEN TRQWWTPDTG GANIPALNDL LKPFGIAFGD 720
  721 FVGEGHFKLG DHSMYYASGA TIVKFPMNPG DIIVGTKLND QGLSIINSKT PSKVAKLDVP 780
  781 IFGMFQTKAN SIQSNEEIVV NAESNLAEAI PTDYSTFKNR VLLLRTKQRS ISFAKSNNHE 840
  841 TKNEGRIAVY GDSNCLDSTH LEKACYWLLI TFLDFAINSH KSSLLQNLNR ITEFHKLERA 900
  901 PLPLRISQSI IKSRSQDNNC EQFKWLAPTK QNNAEERKSS IIDVTILENE EHEINLIKNL 960
  961 LGEEIAKLGQ NNDYLTGMQS ADSLMTPIIF LIILSLIVIM LFVLFLKRRF IL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle