YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG31679-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSESNVHQ WALCALAGVT GFVCGAFVQQ EASIRQLLQQ IRRDPYVYHH RHKLYPMLST  60
   61 FGTDHEARLW NRPTSWADKF RELVLSPILD LVSATVTLKW DSATTTDLLD LVKYGLPSTE 120
  121 NLYVHKDYVV SQDLRTNGVR WICEHFRGDY QRVSSDGGGY STMNLRYNDV YVLSCGSMSI 180
  181 CKAFKRKIWN DLENYVSSMA KEFGSVYAYT GPIYTPTCYE IGKWTMKYEV FDWIPIPVPS 240
  241 HFFKVLIVES GVPGSQPFME AFIIENSRRV GGKLNDHRVK VGEIERYTGL RFNKIMQPVV 300
  301 QFGKDSFTVD TRAWAGRLEE ISEPLVTFPP DQKLNLI

Type	Start	End	Confidence
Signal Peptide	1	25	0.56
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	337	0.97