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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: iPLA2-VIA-PD, iP...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWMALGALA SGFVLQRLLG VDQPANKVVE IKSEALGTLQ VLARDDAMLL FAPPFNSSNE  60
   61 KRAVYEIILQ RPTSDSNTTS FSLYRSPVQQ EAEERFNAFL QRLPVFVSIV KEYYNVNGLQ 120
  121 KACDALADNP SWTLSHLIAY FNLVDYISNP KMLQCVDQAD AATLMSPFQL AIKQGHMEMV 180
  181 KALLPLSKLE HLDINSNSVF HYAASTTKEI INLIIDKSTV NLNHLNSDGY TPLHVACLAD 240
  241 KPENVKALLL AGANVNLNAK DIRKVYKTSA PTTVSSFLRT NVSKLYTQDM KYGGTPLHWC 300
  301 SSRETLHALI MEGCDVNATN FDGRTALHVM VARNRFECVV TLLAHDAEID VLDKDGNAAL 360
  361 HIAIEKKLVP IVQCLVVFGC DINLKNKDGK TPRHMVGNDA SGNKDDEILY ILHSVGAKRC 420
  421 KDTGSKCPPG CNAKGNYNGI PPEAPESVEQ REHIEHMLAT TSRQMMGGFL NAAANGILEK 480
  481 QQPAQKPVVV DTEKELKGQS IMDALLGMFT TKVNADEMKK ENSSDSLASG SQKSAVSSPE 540
  541 QLPSPTSPIA AEIGDKPYGR GRLLCLDGGG IRGLVLVQML LEIEKLSRTP IIHMFDWIAG 600
  601 TSTGGILALA LGCGKTMRQC MGLYLRMKEQ CFVGSRPYNS EFFESILKDN LGEFNVMTDI 660
  661 KHPKIMVTGV MADRKPVDLH LFRNYTSASD ILGIVTPINN RRIPPPQPSE QLVWRAARAT 720
  721 GAAPSYFRAF GRFLDGGLIA NNPTLDAMTE IHEYNMALRS AGRESEAIPV SVVMSLGTGH 780
  781 IPVTELKDID VFRPESIWDT AKLAYGISTI GNLLVDQATC SDGRVVDRAR AWCSTIGIPY 840
  841 FRFNPQLSED IAMDEKDDQK LINMLWHTKA YMHANRNKII EMINFLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle