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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nan-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTESNVTS GVKKQAGVST QALYKFVNLK GGGLLVDMMK RACQTKQFAE IDHAIKTKVE  60
   61 PFLYNKGAGR YFPISKLVLL RNRDRPRTRQ LPEIRALENP DDDFNIHDYC PEVSEAEYIS 120
  121 NPTAYRFVCW DLNMRGAVGE TILHLCLLNA SSLHADLAKR LLKFYPKLIL DIYMSDEYYG 180
  181 ESVLHIAIVN EDPAMVKYLL DANADVQERC CGAFMSAEDT KFSRTDSPDH EYVALCPMTN 240
  241 YDGYVYWGEY PLSFAACLSQ EECFRLVLAR GADPDFQDTN GNTVLHMLVI YEKIEMFDVG 300
  301 YEVGTNIHIK NIQNLTPLTL AAKLGRVEMF FHVMSIEREI YWQLGSITCA AYPLLMIDTI 360
  361 NEETGNINKD SVLNFVVFGD KLEHLELLDG VVIDLLKTKW DTFCKSRFYK QFYMFALYFL 420
  421 ISLFSFILRP GPDAKDEDED GANSTTAKSD LYRQNGSDSY HLHSKRATMT TEYKTFWLNF 480
  481 TEYYDPSEVE VLPAWWESYA QCPLMNLESD LAKLRIMAEL LNFVGAILYL LVALREARFL 540
  541 GLKMFIENLM TAPSRVMFLF SCALMMTIPW LRVSCLTEID DHVTVVIMLT TAPYFLFFCR 600
  601 GFKTVGPFVV MIYRMVMGDL LRFVSIYLVF VMGFSQAFYI IFLTFDNPSS PEDQDAESNP 660
  661 MPSPMESIVA MFLMSLTNFG DYYGAMVSTQ HEYEAKILFF LFMVIVSVLL VNMLIAMMGN 720
  721 TYQKIAEIRN EWQRQWARIV LVVERSVPPA ERLKNFMQYS QSMSDGRRAL VLRLNMTEEK 780
  781 EEMKEVQEMK RIHQRFAKKR QMEREARALR RQQEYEKFFG TAPKSECSDN NNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle