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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Dcp2-PC
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAIKVNNLA LLASLTLQKV LNINNNNNQH SKNNNHSDNS NSKQHEQQKQ QQQPQRRNLD  60
   61 IKSEYDVLNQ LLKTGAVFTA TPTAPIAIER RKQTQQQQRP YAQQAHQQQQ QKQRLNSSIS 120
  121 STHSSTSTNS SYGSSSSEDA AGTSAPTGAG EVVTSAALTP RASTTKASSN KLPEKSKIPS 180
  181 DILDDLASRF IINVPDMELN NLIRMCFQIE LAHWFYLDFF CAPESGEDGE TPKCVQRKLP 240
  241 SVGIKQFAMQ LFQHIPFLNK HFGTVDQILD EWKNYKLSVP TYGAILVSED HNHCLLVQSY 300
  301 FARNSWGFPK GKINENEDPA HCATREASRE YIGILKNIIV YEETGFDITD LIDANDYIEA 360
  361 FINYQYTRLY VVRNIPMDTQ FAPRTRNEIK CCDWFRIDAL PVNKNDAISK AKLGKTSNSF 420
  421 FMIMPFVKRL KKWVNDRKAG IEPRRRKFSG QQSPKAASPT NMNGNCKKDV TGVRNESQRQ 480
  481 RHKSMGDLDG VKLNNLNGKG TVGTGAGSAA SASATAAINS MNICNSNGKR NKQNAAAGSN 540
  541 QATPTTIATP MTSNGAVVGG TVSSKRQLFH SQSQNDAQQS ASNEKQIVSS FDLIRKEKQQ 600
  601 QLKAAKAQKQ QQQQQQRSRT KSQSDKQYNP QQPVKILGQQ QPTTGMDLIA MLSAAAAAQK 660
  661 TPNNEQQTQE KQQQQQRPRP ASVSLNLGAG SATGATTSAP DAQYMHRLQR MASGTNLRIL 720
  721 KRAQSQQPQQ HHQQQLQLEQ QQQQQQQLGI DFTPNLNSWT NFSFTKNFIA NVFC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle