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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mud-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTRSWRKVL LQWIGECHFI ESNYITLEQS DLDSFFSVFI QKIQETENVK GKNELQDQPT  60
   61 EQSPLVQEFL AHNYPEFIAQ QDDKEVDLPL DCLYVYTLLL HYSCVKKPSL FFHNICNKLP 120
  121 ELTQTCIASF FRETVDRLLT REYLSQAIAN VAVVYRQGVS TSVSPCLPSS SLSPDPRSDD 180
  181 APCPSTPSSS SSQPSSSTPQ LRNHREQLRL NGCEMPPPST PKTELLEQRT KELRGIRTQL 240
  241 EVVRYEKALL EEQQMEKDEL IKVLNKEKMM AKMELEKLRN VKLTEEHHDN ESHHIMPYEF 300
  301 EHMKGCLLKE IGLKESLIAE ITDKLHDLRV ENSELSEKLN LAGKRLLEYT DRIRFLESRV 360
  361 DDLTRIVSSR DVMISSLESD KQELDKCLKE ARDDLHNRIE VLNASSDLLD CSLSPNTTPE 420
  421 NLASSVIDKQ LREKEHENAE LKEKLLNLNN SQRELCQALS SFLQKHNIDH EFPVEWTSSS 480
  481 LLSTISAIES KFVNTLEKST QMKKECDVQS VCVEKLLEKC KLLSVSLGCQ PKELDGFEAT 540
  541 IPEAMESGFE SSRECETILS CCHMKVVDIA SKNNDLELDN ERLNDKCAEL KSIIDRGDQH 600
  601 LADINLQLIE KEKQIKDVGA EIQELRKRNI NLENMLSQIA DKEASAASHA QHLKQCGELL 660
  661 RAKYEVCRNE LIAKNAAQDE LVRMMMVPDG ETLNGRVRQL IDLEMMHDEH NKMYAQMLKQ 720
  721 LNELSAKHDN MTHSHLDFVK RTEIELETKN AQIMAFDEHN NHFDRFLTRI FTLLRSRNCP 780
  781 KSTTMGSATN FLESMHIEKR FENIEMLIEG QLLSADDLKR ELDDLRSKNE ELAKQNINGI 840
  841 IKRNKFITSL EVNTEKVKQY ITDLEEEAFK RKQKVVQLEN TLSKEQSNAK EMAQRLDIAQ 900
  901 QEIKDYHVEA IRFINTIRDR LQQDFNGVNT PQQLGTCMTE FLKMYDQMEV RYEESSSLVE 960
  961 KLTESQAKLE MQVAELQVEL ENKDTNQHSG ALIKQLNDTI QNLEKVNAKL SEDNTVSHTV1020
 1021 HSKLNESLLK AQKELDLRAK IIENLEASER NLSMKLCELK DLKNKLKSSD EKIAQIKETY1080
 1081 EEQIKALQAK CDMEAKKNEH LERNQNQSLT QLKEDALENC VLMSTKLEEL QAKLQEGQQL1140
 1141 VDSQKLELDM NRKELALVKS AYEAQTKLSD DLQRQKESGQ QLVDNLKVEL EKERKELAHV1200
 1201 NSAIGAQTKL SDDLECQKES GQQLVDNLKV ELEKERKELA QVKSVIEAQT KLSDDLQREK1260
 1261 ESAQQLVDNL KVELDKERKE LAQVNSAFEA QTKLSDDLQR QKESAQQLVD NLKVELDKER1320
 1321 KELAQVNSAF EAQTKLSDDL QREKESAQQL VDNLKVELDK ERKELAQVKS VIEAQTKLSD1380
 1381 DLQRQKESAQ QLVDNLKVEL DKERKELAKV KSVIEAQTKL SDDLQRQKES AQQLVDNLKM1440
 1441 ELDKERKELA QVKSAIGAQT KLSDDLECQK ESVQQLVDNL KVELEKERKE LAKVNSAFEA1500
 1501 QTKLSDDLKL QKEDAQREVF LVKERLVKEK REFEVKLATL EDIIETLEMR CTQMEEERAT1560
 1561 AYEQINKLEN RCQEKDNVKS SQLQVETFKV ECLHHQLKSE MATHNSLVED LNRKLAEKVS1620
 1621 KLDFVQSRLM TEIAEHNQVK DQLAQITDIP KVVELQHRLE AETAEREEAQ NKLAVVTGRL1680
 1681 DEITRELDNA RLEHGAQILR MEETAREVGN KNAELCELIE FYRNRVEALE RLLLASNQEL1740
 1741 EELNSIQSNQ AEGVRDLGDT YSAAEGRQTE SDQDKERYQK LALDCKILQA KYRDAKDEIK1800
 1801 RCEKKIKDQR LEMEGKLEKM KNKMRSLYTA EVTRMKEKQE RDAAKSASEL EALTAQVDRY1860
 1861 ARCLRSYVIN SIYLQNAKYE EHTRKLSNQI VRLNEKILEQ QKQHAIISTN LRHLQMQPIS1920
 1921 ETKPSSTTLT VSSSSSAPND DWQPFKRPNV PSSNLAMEDE EGEVFNNTYL TDLKLGRVPA1980
 1981 DMTAEELIYR NSLQPPHLKS TYAAQYDLGS QDEDLKDGPH SLDDSMSALL SSSSTGTRKK2040
 2041 SMGTHYKRPG PPTPSKNGGR LSFGSSEPPR EILREFGDHN NTSKTPARFK FLTQRFSVGS2100
 2101 SGLPRDELPR RKRPNLLTGI HRRRLRHAVD IFCTSTPRKS RSYYDQQRMI GASDADKSEA2160
 2161 VETEDEVIEV EPDAVPELEP LEDADQQGTP HLSTAALLAL TKGNTRRLTG TTKSKKGRVS2220
 2221 LSLHGNIFAK SRPASFVAGK RVQLRRKLRR DRIMGRFDEA RHLDQMRLSH SAQAAKSPEN2280
 2281 NNYSLHNRNE EEHLPSENNV MGKTVVLVGK RRLSPVVSTT FNVEERSETS LLQQQFEHEN2340
 2341 CVTWAMHGGE SVMMEETQND WYFEQLCKET ESTAPFQLQP LDYKPLDEEQ VEPKFTQLVA2400
 2401 ASCSNITTTS CATNMTGASS CTVYSIGSVH MQPLPQINIT YVQQPSDLQQ RRPTRHRSLM2460
 2461 AQCRRFLRHL SLGQRLVMGF ALLVMVGLSL HLADKLVLVI TGILSGMGLV FLTYSCPGRN2520
 2521 

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