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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG15744-PA
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTATATSTA AEGGQAVQVQ THQDTELPQN PETGIATGQG TASSCPRKCS CRSTAENIHS  60
   61 LKIRCDEQQI TNWRELDFGE DVTSIVSINA SKNSIALITA EDFRNFTELK RLDLSFNLLT 120
  121 ELDKDTFGDS LAHLEKLKLA GNAISHIYEG TFDQMPKLKL LDLSGNPLAC DCGLIWLIAW 180
  181 SSSREVRLQP PPKCESPGNF RGMPLKKLRV GKDFHCETLL QPLLELIPSQ NQVAFEGDEL 240
  241 QLKCHAPRVA IGVPRESEDL PTKAYVFWGW SEKIRAKNST EDIIYQDPTK VFGDVNLETR 300
  301 HSTDSGILQS ILRIASLTQN HTGMWDCTLR SQQANLSQAI VLHVVAKGTL YCEARVVHTN 360
  361 KGTYHWPRTM RGETVLQECV EEPSDATQAR RASHECGPSG EWLNLDTESC VYVSETTRIL 420
  421 EQFAKVNLTL TKGQNALEIA RRLHNFTQAQ TQLNRIRDPM DLEYIARTLV KYLDQLEQPQ 480
  481 QQQEISHLLM DIVSQLLNLP AHLFRAAQSE QGTGQRLLHV VESSAMRLAL ASTQAEPLPA 540
  541 EMIPWRGSLA QQRNLFVEFF NISLDAFVSL SCVWLEQSPR GFQCNSANDT IPMYEHGDID 600
  601 AAIQLPYSVI GNSSTTLPAT TTIRSLRLMI SLHRNGKLLP NLRGSHNESL SSAIIGILAY 660
  661 SSDGEALQFR ADNELDPEED VYQQRVTVML RAHPYHNPLS APQPAWWDAD EQRWETSVCQ 720
  721 QHYQHRTLVM FSCSRTGYYG LLQRSQYLND FRSEESGARF RHPPAAVYAG CGLLFACCAF 780
  781 NAVTFAVFGR AVRINRVQRH ALVNTWLALG ALALAFSLGI YQTASQPQCR LLGLLMHYLG 840
  841 LCVLLWVCVS LSSMYKRLTK TTTSGQGQCP GQDMEPQRER ERKPILGIYL VGWGIALLIC 900
  901 GISSAVNLAE YATYDYCFLH SSTTLNALLV PAVILVIFCG ILALCIYYQL SQQAVNVLQL 960
  961 QMQHQQNRQY SDNNTQATEH IDLDWLDANG SATTAAIGGG SGNHGGRKEQ DHMQEQYSTL1020
 1021 SNPLSSIVDD FERSNLSHLR GHFIFLVLYA GAWLSAAAYV NGGQELYVLS FAGCCSVLGI1080
 1081 FLLIFYNLSR NDARQAWSQG RDGRSIPAKL VTYNNGSQAR GAHPSSMMPG PGTAMISNSI1140
 1141 VAYKANPGPG SLYEANNSAG SRSNSQCSRS MRSQTRSQTR SQQEQLLQAN GAGGVTIINN1200
 1201 TSGQPGAGGG PAAGGVSGST GGAPVPPHSL NALLHGSSHD LIPSAEIFYN PNQINVARKF1260
 1261 FKKQKRLAKR NNFELQRQTM PQMQLQMQMQ MQLHSQHSLS DASSEQLYSR HHNAMTMLAG1320
 1321 GSKINNTNLH YKNQGSPMAG APKEHGNMGA MSSGGDSMQF KRFVPASASS ASKIMQANIY1380
 1381 TNIPETLTPQ HEVIKLRANG RTRTPSLLDE TLHELDDDEE DEEEEEHGQT PATMEEPEHE1440
 1441 LEEEDASSLD EHAPLYANTL PPASGMSSLF RNRGSSHQPM SSTPVKQPSL EAMNSLGLPE1500
 1501 VSLEEPLLQK HEIYVSNSLQ VTTSNSIQLD DDFPSVLIRF SQQQQSKSLN NISEMLAGGG1560
 1561 GGGGNAPGLD SLGDQQESSQ LSVNEGSTLE EQQLRQIYSC SSSNLSQLKG HHPTATVDTE1620
 1621 DDGRLLSGSP TNESDLNYQN SEISIRSHGL YAPQADNDLN LTLTDDFRCY QSSNASDADV1680
 1681 DVLNEFDDEF VAATGGERVV GDAEQDPHHD HDQDTSIDEL YEAIKCRSPL RNKQEAVERF1740
 1741 ERERERDREK EMEMEAKPLS NSHNENLNET IEDDSSQSSV ISYIDPRAAN EPRPFPS

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