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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCB7-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLLHLTKQ CSIHLPAHLG RAKCYTLAKG PGTHVQARVL YSSLTKVDDK NSSDAKRKKI  60
   61 TPFTPTPGSK LLGGVFGKKA KGGAPAAAAA KTTTLQRQRP YRPQQQQSRL CHVHIGGGSD 120
  121 GGSGLGKLDA PEVTSKDMLR AMMAYIWPKE DPLVRKRVGI SLGLLAGSKL LTVCVPFLFK 180
  181 GAVDTMTTLN MDTAPDAVLS AATALMLGYG IARASAAGFN ELRNAVFAKV AHHSIRKIAS 240
  241 NVFLHLHNLD LAFHLNKQTG ALSKTIDRGS RGINFVLSAM VFNIVPTIFE LALVSSILGV 300
  301 KCGLAFAGVS MGCVGIYAAY TLSVTQWRTQ FRVFMNQAEN EAGNKAVDSL INYETVKYFN 360
  361 NEKYEAGCYN EVLKKYEAAS LKTSSSLALL NFGQNAIFSS ALSLIMVLAA KEIAQGNMTV 420
  421 GDLVMVNALL FQLSIPLGFL GSVYREVRQA LLDMRAMFTL MNVDSSIQTA ANAQPLFVDT 480
  481 TNSSIEFRNV SFEYEPGKPI FRDLSFTIPA GKNVAIVGGS GSGKSSMVRL LFRFFEPNSG 540
  541 KVLIGGQDIS AVDLESLRKV IAVVPQDSVL FHNTIEHNIH YGNLSKSHAE VQNAARMADL 600
  601 HDSIMSWPGQ YSTQVGERGL KLSGGEKQRV AIARAILKNT PILIFDEATS SLDSITEHNI 660
  661 LQALTRATSG RTSICIAHRL STVKDADEIL VLENGRVGER GTHSELLRQN GLYARLWETQ 720
  721 TQQFDPSREI NEEVAAKKTR GVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle