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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG17922-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSMARFRKV NRQSEKLEPE ASASLLKSSP NILENFAYDE FQPIQTNHPL LKRMATTPVA  60
   61 QSGSQSSSSS TSSTRKAEPK FCDTLERHAF MRNVINQQPE STRRYSTPGE KEAQVRRSLE 120
  121 EITKDLKEIE QFVSATEELM QREKEQEQMM YSNKENKCPS PVKRVTYKIN AYKAPPRRHR 180
  181 PGSPRFYHSR LYFRNGKIGC VDSTEHQNNV GATHALVKHI LHHEKPLVSP DSVRRVLEQD 240
  241 SFEMVPLPGA VPEIVPDPIA IQRAEELAAA TGQVVLPKEE EEEEKSSPLH QVESQPDVDE 300
  301 DEQDVQICYN ESPELQNEDR NERTQRTPSI NESEIVAVDE PDTEMNSDVD HRKPSSAGSL 360
  361 DSQGQQFLRD QVRHLVRRFT ARANKVKSRI ELPPTPSSSS TVSSPSPPPT KSLHPSPQHK 420
  421 VRLVPAGQSP HRGRLFEADT PRSNVWLCSS LCGANNDERT LDPQGKIYIS WLCVVSLSFL 480
  481 YNAWVIPLRA SFPFQTKENT NIWLACDFCA DIIYLLDVVF FKHRVMYLFE GFWVKNKNLT 540
  541 RKNYMRKLQF KLDLLALLPL ELLYFKLGTQ AVWLRFPRFF KIQSFWEVFR LLDRVISSPH 600
  601 FVRVAKTLTY MLYMIHITAA LYYAYSDYQG LGQNRWVFSG KGHPYVRCFA FATKTATSIG 660
  661 KNPKPERQGE YVFMTVAWLM GVFVFALLIG QIRDIISTAT RNKHEYRQLE DETLEYMRRL 720
  721 NLSQEVQSRV KMWFQFTWEQ QRTLDESNIL DALPINLKTD IAISVHIQTL SKVQLFADCE 780
  781 EALLRDLVLK LRAVTFLPGD FVCRKGEVGR EMYIVKLGQV QVMGGPSSDV VLATLTEGSV 840
  841 FGEISLLGIN GADRRTADVR SKGYSNLFVL SKSDLNEVIA YYPTAQAILK KRARQLMRKN 900
  901 AAREREEERE RARSALQADV VIGNPKTPET APKLLQTVIQ ALPFESPAVV LITRGSKRMR 960
  961 RKRQSVQMET IVEPKMEVTG AAETQDQKGL KTGRCSPDLL SSIQQELKSK HKFINLTDSE1020
 1021 KALISQSANN SLEDMKVVDL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle