YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300816, Ctr...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHAHHSAPG VDHSMHHDHV GMHHDHSGIP AATASPMDAA SMFDLIPDTS DLQASHAGHA  60
   61 AHGAHNHGGG SGTGMEHMMP MAFHFGYNET ILFSWWHIET VAGLIGSMIA IFLLALMYEG 120
  121 LKYYREYLFW KTYNLLEYRP VTGPQRNPEA PRIPSPAAAA PSPVQPSMLS INHLLQTLLH 180
  181 VLQVTLSFLL MLIFMTYNVW LCLMVVLGAA VGYFLFCWKK SVIVDVTEHC H

Type	Start	End	Confidence
Cytoplasmic	1	67	0.71
Transmembrane Helix	68	84	0.39
Non-Cytoplasmic	85	94	0.54
Transmembrane Helix	95	118	0.86
Cytoplasmic	119	173	0.64
Transmembrane Helix	174	194	0.67
Non-Cytoplasmic	195	196	0.45
Transmembrane Helix	197	217	0.87
Cytoplasmic	218	231	0.71