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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1407707
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRGILLLLL GTTRFSPIQC IFNDVYFKMF SQQAPPEDPC YNKAHEPRAC IPDFVNAAYD  60
   61 APVVASSTCG SSGAQRYCEY QDHERSCHTC DMTDPLRSFP ARSLTDLNNS NNVTCWRSEP 120
  121 VTGSGDNVTL TLSLGKKFEL TYVILQLCPH APRPDSMVIY KSTDHGLSWQ PFQFFSSQCR 180
  181 RLFGRPARQS TGRHNEHEAR CSDVTRPLVS RIAFSTLEGR PSSRDLDSSP VLQDWVTATD 240
  241 IRVVFHRLQR PDPQALLSLE AGGATDLASG KYSVPLANGP AGNNIEANLG GDVATSGSGL 300
  301 HYAISDFSVG GRCKCNGHAS KCSTDASGQL NCECSHNTAG RDCERCKPFH FDRPWARATA 360
  361 KEANECKECN CNKHARQCRF NMEIFRLSQG VSGGVCQNCR HSTTGRNCHQ CKEGFYRDAT 420
  421 KPLTHRKVCK ACDCHPIGSS GKICNSTSGQ CPCKDGVTGL TCNRCARGYQ QSRSHIAPCI 480
  481 KQPPRMINML DTQNTAPEPD APESSPGSGG DRNGAAEWPP SLSTIAPRAA GVKCGKCRVS 540
  541 TKRLNLNKFC KRDYAIMAKV IGRDTSSEAV SREVQRRAMD PDVADYEMDQ VQPGSARSPI 600
  601 TGVYEFQAAD YPNPNPNPRG SEMERFDLQI QAVFKRTRPG ESSGAGNVYG MPNTTLKRGP 660
  661 MTWIIPTKDL ECRCPRIRVN RSYLILGRDS EAPPGYLGIG PHSIVIEWKE DWYRRMKRFQ 720
  721 RRARTCA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle