YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82996542, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGLTEPAG AAAPVVSSAS GAVTMAPVAA LPVRVEGTPV ALGPVTKAPV SVCVESVAPQ  60
   61 PLPAPVGTLV TKVVPVTALP KLGSPRLPAP QIVTVKTPGT TTIQLPANLQ LPPGTVLIKS 120
  121 NSGQLMLVSP QQAVTGAKTT SNITPRPAVP ANTQTVKICT VPNSSSQLMK KVTVAPVKNL 180
  181 TQIGTTVATT ASSTSSGQPV ALPSSVITVT PAKLVNTVST LKSSSLGVLS TPSNDARLKA 240
  241 ETSVAAQTAL PPTVLENVKK CKNFLSMLIK LACSGSQSPE MGQNVKRLVE QLLDAEIEAE 300
  301 EFTRKLYIEL KSAPQPHLVP FLKKSVVALR QLLPNSQSFI ENCVKEVSGD VVISSCTMTT 360
  361 ATSPVVTSTV SPVLVSGATA PRTLSVQQTL NPLAGPGVAN TGVVTLHSVA PAAATGGTTA 420
  421 ATVLLQTSKP LTTSVPNTVA AVSLQPENPV VSGAAVTLAI PSATFGEASA TPLCLPSAKP 480
  481 AITSAGTKAD KPAIGTPVQI VTQPSTLLPQ AAGIPQTAKV KQLVVQQPSG SSVNHVTSIS 540
  541 HSSPLSTQNC GQKTPVNAVM PTTSIIKQIT LPGNKLLSLQ AQRSSIQSNK IKENGPTCFR 600
  601 GEDDINDVTF MAEVNLDEEN ACILAAHSDF VGTLIQSCKE EPFLVIGALQ KRILDIGKKH 660
  661 DITELNSDAV NLISHATQER LRGLLEKLTT IAQHRMTIYK GSENYILSTD TRSQLKFLEK 720
  721 LDQLEKQRKD LEEREMLLKA AKSRSNKEDP EQLRLKQKAK ELQQLELAQI QYRDANLTAL 780
  781 AAIGPRKKRP LESGNESFKD NPSTSGTSSL TATKPFRPRI TRICLRDLIF CMEQEREMKY 840
  841 SRALYLALLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle