YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CBPA2_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTPLLVAL FGYIYCQETF VGDQVLEVIP NDEEQIKTLL QLEAEEHLEL DFWKSPSVPR  60
   61 QTVHVRVPFA SIQDVKVFLE SQGITYSIMI EDVQVLLDQE REEMLFNQQR ERGTNFNFGA 120
  121 YHTLEEIYQE MDNLVAENPG LVSKVNIGSS FENRPMNVLK FSTGGDKPAI WLDAGIHARE 180
  181 WVTQATALWT ANKIASDYGT DPAITSLLNT LDVFLLPVTN PDGYVFSQTS NRMWRKTRSK 240
  241 RSGSFCVGVD PNRNWDANFG GPGASSNPCS DSYHGPSPNS EVEVKSIVDF IKSHGKVKAF 300
  301 ITLHSYSQLL MFPYGYKCAK PDDFNELDEV AQRAAQSLKR LHGTSYKVGP ICSVIYQASG 360
  361 GSIDWAYDLG IKYSFAFELR DTGYYGFLLP AKQILPTAEE TWLGLKTIME HVRDHPY

Type	Start	End	Confidence
Signal Peptide	1	16	0.88
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	417	0.99