YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HYAL4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLPEGQLR LCVFQPVHLT SGLLILFILK SISSLKPARL PVYQRKPFIA AWNAPTDLCL  60
   61 IKYNLTLNLK VFQMVGSPRL KDRGQNVVIF YANRLGYYPW YTSEGVPING GLPQNTSLQV 120
  121 HLKKAAQDIN YYIPSENFSG LAVIDWEYWR PQWARNWNTK DIYRQKSRTL ISDMKENISA 180
  181 ADIEYSAKAT FEKSAKAFME ETIKLGSKSR PKGLWGYYLY PDCHNYNVYA TNYTGSCPEE 240
  241 EVLRNNDLSW LWNSSTALYP AVSIRKSFAD SENTLHFSRF RVRESLRIST MTSQDYALPV 300
  301 FVYTQLGYKE EPLLFLSKQD LISTIGESAA LGAAGIVVWG DMNLTSSEEN CTKVNRFVNS 360
  361 DFGSYIINVT RAAEVCSRHL CKNNGRCVRK TWKAAHYLHL NPASYHIEAS EDGEFIVRGR 420
  421 ASDTDLAVMA ENFLCHCYEG YEGADCREMT EASGPSGLSL SSSSVITLCL LVLAGYQSIQ 480
  481 L

Type	Start	End	Confidence
Cytoplasmic	1	10	0.51
Transmembrane Helix	11	29	0.61
Non-Cytoplasmic	30	481	0.77