YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	K2C72_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQLTLYPG AERLGFSGCS AVISGRLSGS HASVRAGVKG AAFGSRSLFC VGGGRRLALS  60
   61 SAGRSGGFTL GHGGASGGRP GGFVGTVFGS AGLGPTCPSV CPPGGIPQVV VNKSLLAPLN 120
  121 VELDPEIQKV RAQEREQIKA LNNKFASFID KVRFLEQQNQ VLETKWELLQ QLDLNNSKRS 180
  181 LEPVHESYIS NLQKQLEILS GDRVRLDSEL RNMREVVEDC KKRYEVEINR RTAAENEFVV 240
  241 LKKDVDAAYM NKVELQAKVD SLTDDIKFFK VLFEGEIAQM QSHISDTSVI LSMDNNRQLD 300
  301 LDSILAEVRA QYEEIAVKSK AETENMYQCK IQELQATAGQ HGDDLKHTKS EITEINRLIQ 360
  361 RIHSEIGNMK KQCSNLETAI ADAEQRGDCA LKDARAKLDQ LEGALQQAKE ELARMLREHQ 420
  421 ELMNVKLALD MEIATYRKLL ESEESRMAGE YPNSVSISVI SSTNAGPGGA GFSVGFGASS 480
  481 SYNYRPLALE VKTKGSCGSE LKDPPAKTSG SSGTTKKTSR

Type	Start	End	Confidence
Signal Peptide	1	32	0.74
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	520	0.98