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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46485130, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSPCRAQR GFSAHSACSA FSGARGRTGF SSRSLSSSRR CRGSSCGRAW GAETRQGIRF  60
   61 GQGKGGPGFS QCPPGGIQAV TVDQSLLTPL KIEVDPQFQV VKTQETREIR SLNNQFASFI 120
  121 DKVRFLEQQN KVLETKWELL QQLQGNRSPQ GLECIFETCL ARLRQQLEEL QRERRALDSE 180
  181 LKTYQDQEDE YKSKYDQEAY KHASVQNDFV VLKKDVDEVF QSKMDLEGNL ESLKEHVCFL 240
  241 TRLYEEELGQ LKTQADDMSV VLSMDNNRCL DFSDIIAEVR ARYEEITRTS KAEAEAVFQT 300
  301 KYQELQESAQ LQGNSMKEAQ VQISQLRQAI HRLQSQIGSL RKQNDSLQSA IADAEQQGEM 360
  361 AVRDAQAKLD ELEAALRTAK QDMAQMLRDY QELMGTKLSL DVEIAMYRRL LESEECRIST 420
  421 EHTSQVTVSI TEGSIVPGRT CGGQVVVPGR IGTGQVVMPG RECGGHVVMP GRGSGGQVTI 480
  481 PGRGSGGQVT VPRGECGGQV TMPGRGSGGQ VTMPGRGSGG QVTIPGRGSG GQVTVPGRGS 540
  541 GGQVTIPGRG SGGQVTIPGR GSGGQVTVPG RGSGGQVTIP GRGSGGQVTI PGRESGGQVT 600
  601 IPGRESGGQV TMPGREYGGQ VTIPGRESGG QVTMPGRGSG GQVTMPGRGS GGQVTVPGRE 660
  661 YGGQVTVPGR GSGGQVTVPG REYGGQVTVP RGECGGQVTV PGREYGGQVT MPRGECGGQV 720
  721 TMPGREYGGQ VTMPGRESGG QVTVPGREYG GQVTMPRGEC GGQVTVPGRE YGGQVTMPRG 780
  781 ECGGSSDHAW KRIWRPGDRA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle