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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124487323, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.44
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGDWVLLLF LGLRIHLSFG IIPAEEENPA FWNKKAAEAL DAAKKLQPIQ TSAKNLIIFL  60
   61 GDGMGVPTVT ATRILKGQLE GHLGPETPLA MDLFPYMALS KTYNVDRQVP DSAGTATAYL 120
  121 CGVKANYKTI GLSAAARLDQ CNTTFGNEVF SVMYRAKKAG KSVGVVTTTR VQHASPAGTY 180
  181 AHTVNRNWYS DAEMPASALQ DGCKDIATQL ISNMDIDVIL GGGRKFMFPK GTPDPEYPSD 240
  241 SNQSGTRLDD QNLVQTWLSK HQGARYVWNR SELIQASQDP AVTHLMGLFE PTEMKYDANR 300
  301 NPSVDPSLAE MTEVAVRMLS RNPQGFYLFV EGGRIDQGHH AGTAYLALTE AVMFDSAIEK 360
  361 ASQLTNEKDT LILITADHSH VFAFGGYTLR GTSIFGLAPL KALDDKSYTS ILYGNGPGYE 420
  421 LKSGNRPNVT EAQSVDPNYK QQAAVPLSSE THGGEDVAIF ARGPQAHLVH GVQEQNYIAH 480
  481 VMAFAGCLEP YTDCGLAPPA GQSPVITPGQ ATTTNNAAGQ ATTTNNAAGQ ATVLLSLQLL 540
  541 VSMLLLVGTA MVVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle