YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40354210
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVNEKYSTL PAEDRSVHII NICAIEDIGY LPSEGTLLNS LSVDPDAECK YGLYFRDGRR  60
   61 KVDYILVYHH KRPSGNRTLV RRVQHSDTPS GARSVKQDHP LPGKGASLDA GSGEPPMDYH 120
  121 EDDKRFRREE YEGNLLEAGL ELERDEDTKI HGVGFVKIHA PWNVLCREAE FLKLKMPTKK 180
  181 MYHINETRGL LKKINSVLQK ITDPIQPKVA EHRPQTMKRL SYPFSREKQH LFDLSDKDSF 240
  241 FDSKTRSTIV YEILKRTTCT KAKYSMGITS LLANGVYAAA YPLHDGDYNG ENVEFNDRKL 300
  301 LYEEWARYGV FYKYQPIDLV RKYFGEKIGL YFAWLGVYTQ MLIPASIVGI IVFLYGCATM 360
  361 DENIPSMEMC DQRHNITMCP LCDKTCSYWK MSSACATARA SHLFDNPATV FFSVFMALWA 420
  421 ATFMEHWKRK QMRLNYRWDL TGFEEEEEAV KDHPRAEYEA RVLEKSLKKE SRNKETDKVK 480
  481 LTWRDRFPAY LTNLVSIIFM IAVTFAIVLG VIIYRISMAA ALAMNSSPSV RSNIRVTVTA 540
  541 TAVIINLVVI ILLDEVYGCI ARWLTKIEVP KTEKSFEERL IFKAFLLKFV NSYTPIFYVA 600
  601 FFKGRFVGRP GDYVYIFRSF RMEECAPGGC LMELCIQLSI IMLGKQLIQN NLFEIGIPKM 660
  661 KKLIRYLKLK QQSPPDHEEC VKRKQRYEVD YNLEPFAGLT PEYMEMIIQF GFVTLFVASF 720
  721 PLAPLFALLN NIIEIRLDAK KFVTELRRPV AVRAKDIGIW YNILRGIGKL AVIINAFVIS 780
  781 FTSDFIPRLV YLYMYSKNGT MHGFVNHTLS SFNVSDFQNG TAPNDPLDLG YEVQICRYKD 840
  841 YREPPWSENK YDISKDFWAV LAARLAFVIV FQNLVMFMSD FVDWVIPDIP KDISQQIHKE 900
  901 KVLMVELFMR EEQDKQQLLE TWMEKERQKD EPPCNHHNTK ACPDSLGSPA PSHAYHGGVL 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle