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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89031582, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPRLAACV SLATVSMVRG ISRSGLDRSD FCACASPGAC PPSSNCPTQR VGGVGLGTLR  60
   61 RLSPRPQHPE LFSGQACACS PSLPPGAAAT HPQMVGPEDA GACSGRNPKL LPVPAPDPVG 120
  121 QDRKVIRATG GFGGGVGAVE PPEEADEEEE ADEEEETPPR QLLQRYLAAA GEQLEPGLCY 180
  181 CPLPAGQAGA PPPSAAPRSD ACLLGSGSKH RGAEVADGRA PRHEGMTNGD SGFLPGRDCR 240
  241 DLEEARGLAR AGGRESRRRR PYGRLRLEGP GDEDADGAGS PSDWASPLED PLRSCCLVAA 300
  301 DAQEPEGAGS DSGDSPASSC SSSEDSEQRG VGAGGPEEGA PPATSAERTN GGAEPRLGFS 360
  361 DIHFNSRNTF QVSRGQSARD HLPPAGPPVP LPAAEQGPAG ASARARRSGG FADFFTRNLF 420
  421 PKRTKELKSV VHSAPGWKLF GKVPPRENLQ KTSKIIQQEY EARTGRTCKP PPQSSRRKNF 480
  481 EFEPLSTTAL ILEDRPSNLP AKSVEEALRH RQEYDEMVAE AKKREIKEAH KRKRIMKERF 540
  541 KQEENIASAM VIWINEILPN WEVMRSTRRV RELWWQGLPP SVRGKVWSLA VGNELNITPE 600
  601 LYEIFLSRAK ERWKSFSETS SENDTEGVSV ADREASLELI KLDISRTFPS LYIFQKGGPY 660
  661 HDVLHSILGA YTCYRPDVGY VQGMSFIAAV LILNLEEADA FIAFANLLNK PCQLAFFRVD 720
  721 HSMMLKYFAT FEVFFEENLS KLFLHFKSYS LTPDIYLIDW IFTLYSKSLP LDLACRVWDV 780
  781 FCRDGEEFLF RTGLGILRLY EDILLQMDFI HIAQFLTKLP EDITSEKLFS CIAAIQMQNS 840
  841 TKKWTQVFAS VMKDIKEGDK NSSPALKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle