YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22597198, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSRGASRC PRDIANVMQR LQDEQEIVQK RTFTKWINSH LAKRKPPMVV DDLFEDMKDG  60
   61 VKLLALLEVL SGQKLPCEQG RRMKRIHAVA NIGTALKFLE GRKSMHRGSP IKLVNINSTD 120
  121 IADGRPSIVL GLMWTIILYF QIEELTSNLP QLQSLSSSAS SVDSIVSSET PSPPSKRKVT 180
  181 TKIQGNAKKA LLKWVQYTAG KQTGIEVKDF GKSWRSGVAF HSVIHAIRPE LVDLETVKGR 240
  241 SNRENLEDAF TIAETELGIP RLLDPEDVDV DKPDEKSIMT YVAQFLKHYP DIHNASTDGQ 300
  301 EDDEILPGFP SFANSVQNFK REDRVIFKEM KVWIEQFERD LTRAQMVESN LQDKYQSFKH 360
  361 FRVQYEMKRK QIEHLIQPLH RDGKLSLDQA LVKQSWDRVT SRLFDWHIQL DKSLPAPLGT 420
  421 IGAWLYRAEV ALREEITVQQ VHEETANTIQ RKLEQHKDLL QNTDAHKRAF HEIYRTRSVN 480
  481 GIPVPPDQLE DMAERFHFVS STSELHLMKM EFLELKYRLL SLLVLAESKL KSWIIKYGRR 540
  541 ESVEQLLQNY VSFIENSKFF EQYEVTYQIL KQTAEMYVKA DGSVEEAENV MKFMNETTAQ 600
  601 WRNLSVEVRS VRSMLEEVIS NWDRYGNTVA SLQAWLEDAE KMLNQSENAK KDFFRNLPHW 660
  661 IQQHTAMNDA GNFLIETCDE MVSRDLKQQL LLLNGRWREL FMEVKQYAQA DEMDRMKKEY 720
  721 TDCVVTLSAF ATEAHKKLSE PLEVSFMNVK LLIQDLEDIE QRVPVMDAQY KIITKTAHLI 780
  781 TKESPQEEGK EMFATMSKLK EQLTKVKECY SPLLYESQQL LIPLEELEKQ MTSFYDSLGK 840
  841 INEIITVLER EAQSSALFKQ KHQELLACQE NCKKTLTLIE KGSQSVQKFV TLSNVLKHFD 900
  901 QTRLQRQIAD IHVAFQSMVK KTGDWKKHVE TNSRLMKKFE ESRAELEKVL RIAQEGLEEK 960
  961 GDPEELLRRH TEFFSQLDQR VLNAFLKACD ELTDILPEQE QQGLQEAVRK LHKQWKDLQG1020
 1021 EAPYHLLHLK IDVEKNRFLA SVEECRTELD RETKLMPQEG SEKIIKEHRV FFSDKGPHHL1080
 1081 CEKRLQLIEE LCVKLPVRDP VRDTPGTCHV TLKELRAAID STYRKLMEDP DKWKDYTSRF1140
 1141 SEFSSWISTN ETQLKGIKGE AIDTANHGEV KRAVEEIRNG VTKRGETLSW LKSRLKVLTE1200
 1201 VSSENEAQKQ GDELAKLSSS FKALVTLLSE VEKMLSNFGD CVQYKEIVKN SLEELISGSK1260
 1261 EVQEQAEKIL DTENLFEAQQ LLLHHQQKTK RISAKKRDVQ QQIAQAQQGE GGLPDRGHEE1320
 1321 LRKLESTLDG LERSRERQER RIQVTLRKWE RFETNKETVV RYLFQTGSSH ERFLSFSSLE1380
 1381 SLSSELEQTK EFSKRTESIA VQAENLVKEA SEIPLGPQNK QLLQQQAKSI KEQVKKLEDT1440
 1441 LEEDIKTMEM VKTKWDHFGS NFETLSVWIT EKEKELNALE TSSSAMDMQI SQIKVTIQEI1500
 1501 ESKLSSIVGL EEEAQSFAQF VTTGESARIK AKLTQIRRYG EELREHAQCL EGTILGHLSQ1560
 1561 QQKFEENLRK IQQSVSEFED KLAVPIKICS SATETYKVLQ EHMDLCQALE SLSSAITAFS1620
 1621 ASARKVVNRD SCVQEAAALQ QQYEDILRRA KERQTALENL LAHWQRLEKE LSSFLTWLER1680
 1681 GEAKASSPEM DISADRVKVE GELQLIQALQ NEVVSQASFY SKLLQLKESL FSVASKDDVK1740
 1741 MMKLHLEQLD ERWRDLPQII NKRINFLQSV VAEHQQFDEL LLSFSVWIKL FLSELQTTSE1800
 1801 ISIMDHQVAL TRHKDHAAEV ESKKGELQSL QGHLAKLGSL GRAEDLHLLQ GKAEDCFQLF1860
 1861 EEASQVVERR QLALSHLAEF LQSHASLSGI LRQLRQTVEA TNSMNKNESD LIEKDLNDAL1920
 1921 QNAKALESAA VSLDGILSKA QYHLKIGSSE QRTSCRATAD QLCGEVERIQ NLLGTKQSEA1980
 1981 DALAVLKKAF QDQKEELLKS IEDIEERTDK ERLKEPTRQA LQQRLRVFNQ LEDELNSHEH2040
 2041 ELCWLKDKAK QIAQKDVAFA PEVDREINRL EVTWDDTKRL IHENQGQCCG LIDLMREYQN2100
 2101 LKSAVSKVLE NASSVIVTRT TIKDQEDLKW AFSKHETAKN KMNYKQKDLD NFTSKGKHLL2160
 2161 SELKKIHSSD FSLVKTDMES TVDKWLDVSE KLEENMDRLR VSLSIWDDVL STRDEIEGWS2220
 2221 NNCVPQMAEN ISNLDNHLRA EELLKEFESE VKNKALRLEE LHSKVNDLKE LTKNLETPPD2280
 2281 LQFIEADLMQ KLEHAKEITE VAKGTLKDFT AQSTQVEKFI NDITTWFTKV EESLMNCAQN2340
 2341 ETCEALKKVK DIQKELQSQQ SNISSTQENL NSLCRKYHSA ELESLGRAMT GLIKKHEAVS2400
 2401 QLCSKTQASL QESLEKHFSE SMQEFQEWFL GAKAAAKESS DRTGDSKVLE AKLHDLQNIL2460
 2461 DSVSDGQSKL DAVTQEGQTL YAHLSKQIVS SIQEQITKAN EEFQAFLKQC LKDKQALQDC2520
 2521 ASELGSFEDQ HRKLNLWIHE MEERFNTENL GESKQHIPEK KNEVHKVEMF LGELLAARES2580
 2581 LDKLSQRGQL LSEEGHGAGQ EGRLCSQLLT SHQNLLRMTK EKLRSCQVAL QEHEALEEAL2640
 2641 QSMWFWVKAI QDRLACAEST LGSKDTLEKR LSQIQDILLM KGEGEVKLNM AIGKGEQALR2700
 2701 SSNKEGQRVI QTQLETLKEV WADIMSSSVH AQSTLESVIS QWNDYVERKN QLEQWMESVD2760
 2761 QKIEHPLQPQ PGLKEKFVLL DHLQSILSEA EDHTRALHRL IAKSRELYEK TEDESFKDTA2820
 2821 QEELKTQFND IMTVAKEKMR KVEEIVKDHL MYLDAVHEFT DWLHSAKEEL HRWSDMSGDS2880
 2881 SATQKKLSKI KELIDSREIG ASRLSRVESL APEVKQNTTA SGCELMHTEM QALRADWKQW2940
 2941 EDSVFQTQSC LENLVSQMAL SEQEFSGQVA QLEQALEQFS ALLKTWAQQL TLLEGKNTDE3000
 3001 EIVECWHKGQ EILDALQKAE PRTEDLKSQL NELCRFSRDL STYSGKVSGL IKEYNCLCLQ3060
 3061 ASKGCQNKEQ ILQQRFRKAF RDFQQWLVNA KITTAKCFDI PQNISEVSTS LQKIQEFLSE3120
 3121 SENGQHKLNM MLSKGELLST LLTKEKAKGI QAKVTAAKED WKNFHSNLHQ KESALENLKI3180
 3181 QMKDFEVSAE PIQDWLSKTE KMVHESSNRL YDLPAKRREQ QKLQSVLEEI HCYEPQLNRL3240
 3241 KEKAQQLWEG QAASKSFRHR VSQLSSQYLA LSNLTKEKVS RLDRIVAEHN QFSLGIKELQ3300
 3301 DWMTDAIHML DSYCHPTSDK SVLDSRTLKL EALLSVKQEK EIQMKMIVTR GESVLQNTSP3360
 3361 EGIPTIQQQL QSVKDMWASL LSAGIRCKSQ LEGALSKWTS YQDGVRQFSG WMDSMEANLN3420
 3421 ESERQHAELR DKTTMLGKAK LLNEEVLSYS SLLETIEVKG AGMTEHYVTQ LELQDLQERY3480
 3481 RAIQERAKEA VTKSEKLVRL HQEYQRDLKA FEVWLGQEQE KLDQYSVLEG DAHTHETTLR3540
 3541 DLQELQVHCA EGQALLNSVL HTREDVIPSG IPQAEDRALE SLRQDWQAYQ HRLSETRTQF3600
 3601 NNVVNKLRLM EQKFQQVDEW LKTAEEKKWH EEVTAYRDEV EEVGARAQEI LDESHVNSRM3660
 3661 GCQATQLTSR YQALLLQVLE QIKFLEEEIQ SLEESESSLS SYSDWYGSTH KNFKNVATKI3720
 3721 DKVDTVMMGK KLKTLEVLLK DMEKGHSLLK SAREKGERAV KYLEEGEAER LRKEIHDHME3780
 3781 QLKELTSTVR KEHMTLEKGL HLAKEFSDKC KALTQWIAEY QEILHVPEEP KMELYEKKAQ3840
 3841 LSKYKSLQQT VLSHEPSVKS VREKGEALLE LVQDVTLKDK IDQLQSDYQD LCSIGKAMME3900
 3901 EIAGFEDRLN NLQMKGDTLI GQCADHLQAK LKQNVHAHLQ GTKDSYSAIC STAQRMYQSL3960
 3961 EHELQKHVSR QDTLQQCQAW LSAVQPDLEP SPQPPLSRAE AIKQVKHFRA LQEQARTYLD4020
 4021 LLCSMCDLSN ASVKTTAKDI QQTEQTIEQK LVQAQNLTQG WEEIKHLKSE LWIYLQDADQ4080
 4081 QLQNMKRRHS ELELNIAQNM VSQVKDFVKK LQSKQASVNT IIEKVNKLTK KEESPEHKEI4140
 4141 NHLNDQWLDL CRQSNNLCLQ REEDLQRTRD YHDCMNVVEV FLEKFTTEWD NLARSDAEST4200
 4201 AVHLEALKKL ALALQERKYA IEDLKDQKQK MIEHLNLDDK ELVKEQTSHL EQRWFQLEDL4260
 4261 IKRKIQVSVT NLEELNVVQS RFQELMEWAE EQQPNIAEAL KQSPPPDMAQ NLLMDHLAIC4320
 4321 SELEAKQMLL KSLIKDADRV MADLGLNERQ VIQKALSDAQ SHVNCLSDLV GQRRKYLNKA4380
 4381 LSEKTQFLMA VFQATSQIQQ HERKIMFREH ICLLPDDVSK QVKTCKSAQA SLKTYQNEVT4440
 4441 GLWAQGRELM KEVTEQEKSE VLGKLQELQS VYDSVLQKCS HRLQELEKNL VSRKHFKEDF4500
 4501 DKACHWLKQA DIVTFPEINL MNESSELHTQ LAKYQNILEQ SPEYENLLLT LQRTGQTILP4560
 4561 SLNEVDHSYL SEKLNALPRQ FNVIVALAKD KFYKVQEAIL ARKEYASLIE LTTQSLSELE4620
 4621 AQFLRMSKVP TDLAVEEALS LQDGCRAILD EVAGLGEAVD ELNQKKEGFR STGQPWQPDK4680
 4681 MLHLVTLYHR LKRQTEQRVS LLEDTTSAYQ EHEKMCQQLE RQLKSVKEEQ SKVNEETLPA4740
 4741 EEKLKMYHSL AGSLQDSGIV LKRVTIHLED LAPHLDPLAY EKARHQIQSW QGELKLLTSA4800
 4801 IGETVTECES RMVQSIDFQT EMSRSLDWLR RVKAELSGPV YLDLNLQDIQ EEIRKIQIHQ4860
 4861 EEVQSSLRIM NALSHKEKEK FTKAKELISA DLEHSLAELS ELDGDIQEAL RTRQATLTEI4920
 4921 YSQCQRYYQV FQAANDWLED AQELLQLAGN GLDVESAEEN LKSHMEFFST EDQFHSNLEE4980
 4981 LHSLVATLDP LIKPTGKEDL EQKVASLELR SQRMSRDSGA QVDLLQRCTA QWHDYQKARE5040
 5041 EVIELMNDTE KKLSEFSLLK TSSSHEAEEK LSEHKALVSV VNSFHEKIVA LEEKASQLEK5100
 5101 TGNDASKATL SRSMTTVWQR WTRLRAVAQD QEKILEDAVD EWTGFNNKVK KATEMIDQLQ5160
 5161 DKLPGSSAEK ASKAELLTLL EYHDTFVLEL EQQQSALGML RQQTLSMLQD GAAPTPGEEP5220
 5221 PLMQEITAMQ DRCLNMQEKV KTNGKLVKQE LKDREMVETQ INSVKCWVQE TKEYLGNPTI5280
 5281 EIDAQLEELQ ILLTEATNHR QNIEKMAEEQ KEKYLGLYTI LPSELSLQLA EVALDLKIRD5340
 5341 QIQDKIKEVE QSKATSQELS RQIQKLAKDL TTILTKLKAK TDNVVQAKTD QKVLGEELDG5400
 5401 CNSKLMELDA AVQKFLEQNG QLGKPLAKKI GKLTELHQQT IRQAENRLSK LNQAASHLEE5460
 5461 YNEMLELILK WIEKAKVLAH GTIAWNSASQ LREQYILHQT LLEESKEIDS ELEAMTEKLQ5520
 5521 YLTSVYCTEK MSQQVAELGR ETEELRQMIK IRLQNLQDAA KDMKKFEAEL KKLQAALEQA5580
 5581 QATLTSPEVG RLSLKEQLSH RQHLLSEMES LKPKVQAVQL CQSALRIPED VVASLPLCHA5640
 5641 ALRLQEEASR LQHTAIQQCN IMQAAVVQYE QYEQEMKHLQ QLIEGAHREI EDKPVATSNI5700
 5701 QELQAQISRH EELAQKIKGY QEQIASLNSK CKMLTMKAKH ATMLLTVTEV EGLAEGTEDL5760
 5761 DGELLPTPSA HPSVVMMTAG RCHTLLSPVT EESGEEGTNS EISSPPACRS PSPVANTDAS5820
 5821 VNQDIAYYQA LSAERLQTDA AKIHPSTSAS QEFYEPGLEP SATAKLGDLQ RSWETLKNVI5880
 5881 SEKQRTLYEA LERQQKYQDS LQSISTKMEA IELKLSESPE PGRSPESQMA EHQALMDEIL5940
 5941 MLQDEINELQ SSLAEELVSE SCEADPAEQL ALQSTLTVLA ERMSTIRMKA SGKRQLLEEK6000
 6001 LNDQLEEQRQ EQALQRYRCE ADELDSWLLS TKATLDTALS PPKEPMDMEA QLMDCQNMLV6060
 6061 EIEQKVVALS ELSVHNENLL LEGKAHTKDE AEQLAGKLRR LKGSLLELQR ALHDKQLNMQ6120
 6121 GTAQEKEESD VDLTATQSPG VQEWLAQART TWTQQRQSSL QQQKELEQEL AEQKSLLRSV6180
 6181 ASRGEEILIQ HSAAETSGDA GEKPDVLSQE LGMEGEKSSA EDQMRMKWES LHQEFSTKQK6240
 6241 LLQNVLEQEQ EQVLYSRPNR LLSGVPLYKG DVPTQDKSAV TSLLDGLNQA FEEVSSQSGG6300
 6301 AKRQSIHLEQ KLYDGVSATS TWLDDVEERL FVATALLPEE TETCLFNQEI LAKDIKEMSE6360
 6361 EMDKNKNLFS QAFPENGDNR DVIEDTLGCL LGRLSLLDSV VNQRCHQMKE RLQQILNFQN6420
 6421 DLKVLFTSLA DNKYIILQKL ANVFEQPVAE QIEAIQQAED GLKEFDAGII ELKRRGDKLQ6480
 6481 VEQPSMQELS KLQDMYDELM MIIGSRRSGL NQNLTLKSQY ERALQDLADL LETGQEKMAG6540
 6541 DQKIIVSSKE EIQQLLDKHK EYFQGLESHM ILTETLFRKI ISFAVQKETQ FHTELMAQAS6600
 6601 AVLKRAHKRG VELEYILETW SHLDEDQQEL SRQLEVVESS IPSVGLVEEN EDRLIDRITL6660
 6661 YQHLKSSLNE YQPKLYQVLD DGKRLLISIS CSDLESQLNQ LGECWLSNTN KMSKELHRLE6720
 6721 TILKHWTRYQ SESADLIHWL QSAKDRLEFW TQQSVTVPQE LEMVRDHLNA FLEFSKEVDA6780
 6781 QSSLKSSVLS TGNQLLRLKK VDTATLRSEL SRIDSQWTDL LTNIPAVQEK LHQLQMDKLP6840
 6841 SRHAISEVMS WISLMENVIQ KDEDNIKNSI GYKAIHEYLQ KYKGFKIDIN CKQLTVDFVN6900
 6901 QSVLQISSQD VESKRSDKTD FAEQLGAMNK SWQILQGLVT EKIQLLEGLL ESWSEYENNV6960
 6961 QCLKTWFETQ EKRLKQQHRI GDQASVQNAL KDCQDLEDLI KAKEKEVEKI EQNGLALIQN7020
 7021 KKEDVSSIVM STLRELGQTW ANLDHMVGQL KILLKSVLDQ WSSHKVAFDK INSYLMEARY7080
 7081 SLSRFRLLTG SLEAVQVQVD NLQNLQDDLE KQERSLQKFG SITNQLLKEC HPPVTETLTN7140
 7141 TLKEVNMRWN NLLEEIAEQL QSSKALLQLW QRYKDYSKQC ASTVQQQEDR TNELLKAATN7200
 7201 KDIADDEVAT WIQDCNDLLK GLGTVKDSLF FLHELGEQLK QQVDASAASA IQSDQLSLSQ7260
 7261 HLCALEQALC KQQTSLQAGV LDYETFAKSL EALEAWIVEA EEILQGQDPS HSSDLSTIQE7320
 7321 RMEELKGQML KFSSMAPDLD RLNELGYRLP LNDKEIKRMQ NLNRHWSLIS SQTTERFSKL7380
 7381 QSFLLQHQTF LEKCETWMEF LVQTEQKLAV EISGNYQHLL EQQRAHELFQ AEMFSRQQIL7440
 7441 HSIIIDGQRL LEQGQVDDRD EFNLKLTLLS NQWQGVIRRA QQRRGIIDSQ IRQWQRYREM7500
 7501 AEKLRKWLVE VSYLPMSGLG SVPIPLQQAR TLFDEVQFKE KVFLRQQGSY ILTVEAGKQL7560
 7561 LLSADSGAEA ALQAELAEIQ EKWKSASMRL EEQKKKLAFL LKDWEKCEKG IADSLEKLRT7620
 7621 FKKKLSQSLP DHHEELHAEQ MRCKELENAV GSWTDDLTQL SLLKDTLSAY ISADDISILN7680
 7681 ERVELLQRQW EELCHQLSLR RQQIGERLNE WAVFSEKNKE LCEWLTQMES KVSQNGDILI7740
 7741 EEMIEKLKKD YQEEIAIAQE NKIQLQQMGE RLAKASHESK ASEIEYKLGK VNDRWQHLLD7800
 7801 LIAARVKKLK ETLVAVQQLD KNMSSLRTWL AHIESELAKP IVYDSCNSEE IQRKLNEQQE7860
 7861 LQRDIEKHST GVASVLNLCE VLLHDCDACA TDAECDSIQQ ATRNLDRRWR NICAMSMERR7920
 7921 LKIEETWRLW QKFLDDYSRF EDWLKSSERT AAFPSSSGVI YTVAKEELKK FEAFQRQVHE7980
 7981 CLTQLELINK QYRRLARENR TDSACSLKQM VHEGNQRWDN LQKRVTSILR RLKHFIGQRE8040
 8041 EFETARDSIL VWLTEMDLQL TNIEHFSECD VQAKIKQLKA FQQEISLNHN KIEQIIAQGE8100
 8101 QLIEKSEPLD AAIIEEELDE LRRYCQEVFG RVERYHKKLI RLPLPDDEHD LSDRELELED8160
 8161 SAALSDLHWH DRSADSLLSP QPSSNLSLSL AQPLRSERSG RDTPASVDSI PLEWDHDYDL8220
 8221 SRDLESAMSR ALPSEDEEGQ DDKDFYLRGA VGLSDVMIPE SPEAYVKLTE NAIKNTSGDH8280
 8281 SALESQIRQL GKALDDSRFQ IQQTENIIRS KTPTGPELDT SYKGYMKLLG ECSSSIDSVK8340
 8341 RLEHKLKEEE ESLPGFVNLH STETQTAGVI DRWELLQAQA LSKELRMKQN LQKWQQFNSD8400
 8401 LNSIWAWLGD TEEELEQLQR LELSTDIQTI ELQIKKLKEL QKAVDHRKAI ILSINLCSPE8460
 8461 FTQADSKESR DLQDRLSQMN GRWDRVCSLL EEWRGLLQDA LMQCQGFHEM SHGLLLMLEN8520
 8521 IDRRKNEIVP IDSNLDAEIL QDHHKQLMQI KHELLESQLR VASLQDMSCQ LLVNAEGTDC8580
 8581 LEAKEKVHVI GNRLKLLLKE VSRHIKELEK LLDVSSSQQD LSSWSSADEL DTSGSVSPTS8640
 8641 GRSTPNRQKT PRGKCSLSQP GPSVSSPHSR STKGGSDSSL SEPGPGRSGR GFLFRVLRAA8700
 8701 LPLQLLLLLL IGLACLVPMS EEDYSCALSN NFARSFHPML RYTNGPPPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle