YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VMO1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGAGAKLL PLLLLLRATG FTCAQTDGRN GYTAVIEVTS GGPWGDWAWP EMCPDGFFAS  60
   61 GFSLKVEPPQ GIPGDDTALN GIRLHCARGN VLGNTHVVES QSGSWGEWSE PLWCRGGAYL 120
  121 VAFSLRVEAP TTLGDNTAAN NVRFRCSDGE ELQGPGLSWG DFGDWSDHCP KGACGLQTKI 180
  181 QGPRGLGDDT ALNDARLFCC RS

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	202	0.99