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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31652238
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANVGSMFQ YWKRFDLQQL QRELDATATV LANRQDESEQ SRKRLIEQSR EFKKNTPEDL  60
   61 RKQVAPLLKS FQGEIDALSK RSKEAEAAFL NVYKRLIDVP DPVPALDLGQ QLQLKVQRLH 120
  121 DIETENQKLR ETLEEYNKEF AEVKNQEVTI KALKEKIREY EQTLKNQAET IALEKEQKLQ 180
  181 NDFAEKERKL QETQMSTTSK LEEAEHKVQS LQTALEKTRT ELFDLKTKYD EETTAKADEI 240
  241 EMIMTDLERA NQRAEVAQRE AETLREQLSS ANHSLQLASQ IQKAPDVAIE VLTRSSLEVE 300
  301 LAAKEREIAQ LVEDVQRLQA SLTKLRENSA SQISQLEQQL SAKNSTLKQL EEKLKGQADY 360
  361 EEVKKELNIL KSMEFAPSEG AGTQDAAKPL EVLLLEKNRS LQSENAALRI SNSDLSGRCA 420
  421 ELQVRITEAV ATATEQRELI ARLEQDLSII QSIQRPDAEG AAEHRLEKIP EPIKEATALF 480
  481 YGPAAPASGA LPEGQVDSLL SIISSQRERF RARNQELEAE NRLAQHTLQA LQSELDSLRA 540
  541 DNIKLFEKIK FLQSYPGRGS GSDDTELRYS SQYEERLDPF SSFSKRERQR KYLSLSPWDK 600
  601 ATLSMGRLVL SNKMARTIGF FYTLFLHCLV FLVLYKLAWS ESMERDCATF CAKKFADHLH 660
  661 KFHENDNGAA AGDLWQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle