YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7019553, gi\|5...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAPNAGG SAPETAGSAE APLQYSLLLQ YLVGDKRQPR LLEPGSLGGI PSPAKSEEQK  60
   61 MIEKAMESCA FKAALACVGG FVLGGAFGVF TAGIDTNVGF DPKDPYRTPT AKEVLKEHGQ 120
  121 RGMSYAKNFA IVGAMFSCTW CLIESYRGTS DLKNSVISGC ITGGAYWFRA GLKAGALLCG 180
  181 GFAAFSAAID YYLR

Type	Start	End	Confidence
Cytoplasmic	1	68	0.99
Transmembrane Helix	69	92	0.89
Non-Cytoplasmic	93	128	0.91
Transmembrane Helix	129	146	0.71
Cytoplasmic	147	169	0.57
Transmembrane Helix	170	189	0.88
Non-Cytoplasmic	190	194	0.49