YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119609365, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLSRQLCA LSHPKKAAET QTAEPGGAHA VCSRHPVRVK GLEGSEMESA RENIDLQPGS  60
   61 SDPRSQPINL NHYATKKSVA ESMLDVALFM SNAMRLKAVL EQGPSSHYYT TLVTLISLSL 120
  121 LLQVVIGVLL VVIARLNLNE VEKQWRLNQL NNAATILVFF TVVINVFITA FGAHKTGFLA 180
  181 ARASRNPL

Type	Start	End	Confidence
Cytoplasmic	1	110	0.67
Transmembrane Helix	111	134	0.88
Non-Cytoplasmic	135	152	0.56
Transmembrane Helix	153	174	0.91
Cytoplasmic	175	188	0.55