YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40068471
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPAARVVRA LWPGGCALAW RLGGRPQPLL PTQSRAGFAG AAGGPSPVAA ARKGSPRLLG  60
   61 AAALALGGAL GLYHTARWHL RAQDLHAERS AAQLSLSSRL QLTLYQYKTC PFCSKVRAFL 120
  121 DFHALPYQVV EVNPVRRAEI KFSSYRKVPI LVAQEGESSG RQI

Type	Start	End	Confidence
Cytoplasmic	1	57	0.47
Transmembrane Helix	58	76	0.78
Non-Cytoplasmic	77	163	0.58