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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119626060, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKATVPVAA ATAAEGEGSP PAVAAVAGPP AAAEVGGGVG GSSRARSASS PRGMVRVCDL  60
   61 LLKKKPPQQQ HHKAKRNRTC RPPSSSESSS DSDNSGGGGG GGGGGGGGGG TSSNNSEEEE 120
  121 DDDDEEEEVS EVESFILDQD DLENPMLETA SKLLLSGTAD GADLRTVDPE TQARLEALLE 180
  181 AAGIGKLSTA DGKAFADPEV LRRLTSSVSC ALDEAAAALT RMRAESTANA GQSDNRSLAE 240
  241 ACSEGDVNAV RKLLIEGRSV NEHTEEGESL LCLACSAGYY ELAQVLLAMH ANVEDRGIKG 300
  301 DITPLMAAAN GGHVKIVKLL LAHKADVNAQ SSTGNTALTY ACAGGYVDVV KVLLESGASI 360
  361 EDHNENGHTP LMEAGSAGHV EVARLLLENG AGINTHSNEF KESALTLACY KGHLEMVRFL 420
  421 LEAGADQEHK TDEMHTALME ACMDGHVEVA RLLLDSGAQV NMPADSFESP LTLAACGGHV 480
  481 ELAALLIERG ASLEEVNDEG YTPLMEAARE GHEEMVALLL GQGANINAQT EETQETALTL 540
  541 ACCGGFLEVA DFLIKAGADI ELGCSTPLME AAQEGHLELV KYLLAAGANV HATTATGDTA 600
  601 LTYACENGHT DVADVLLQAG ADLEHESEGG RTPLMKAARA GHVCTVQFLI SKGANVNRTT 660
  661 ANNDHTVLSL ACAGGHLAVV ELLLAHGADP THRLKDGSTM LIEAAKGGHT SVVCYLLDYP 720
  721 NNLLSAPPPD VTQLTPPSHD LNRAPRVPVQ ALPMVVPPQE PDKPPANVAT TLPIRNKAVS 780
  781 GRASAMSNTP THSIAASISQ PQTPTPSPII SPSAMLPIYP AIDIDAQTES NHDTALTLAC 840
  841 AGGHEELVQT LLERGASIEH RDKKGFTPLI LAATAGHVGV VEILLDNGAD IEAQSERTKD 900
  901 TPLSLACSGG RQEVVELLLA RGANKEHRNV SDYTPLSLAA SGGYVNIIKI LLNAGAEINS 960
  961 RTGSKLGISP LMLAAMNGHT AAVKLLLDMG SDINAQIETN RNTALTLACF QGRTEVVSLL1020
 1021 LDRKANVEHR AKTGLTPLME AASGGYAEVG RVLLDKGADV NAPPVPSSRD TALTIAADKG1080
 1081 HYKFCELLIG RGAHIDVRNK KGNTPLWLAA NGGHLDVVQL LVQAGADVDA ADNRKITPLM1140
 1141 AAFRKGHVKV VRYLVKEVNQ FPSDSECMRY IATITDKEML KKCHLCMESI VQAKDRQAAE1200
 1201 ANKNASILLE ELDLEKLREE SRRLALAAKR EKRKEKRRKK KEEQRRKLEE IEAKNKENFE1260
 1261 LQAAQEKEKL KVEDEPEVLT EPPSATTTTT IGISATWTTL AGSHGKRNNT ITTTSSKRKN1320
 1321 RKNKITPENV QIIFDDPLPI SYSQPEKVNG ESKSSSTSES GDSDNMRISS CSDESSNSNS1380
 1381 SRKSDNHSPA VVTTTVSSKK QPSVLVTFPK EERKSVSGKA SIKLSETISE GTSNSLSTCT1440
 1441 KSGPSPLSSP NGKLTVASPK RGQKREEGWK EVVRRSKKVS VPSTVISRVI GRGGCNINAI1500
 1501 REFTGAHIDI DKQKDKTGDR IITIRGGTES TRQATQLINA LIKDPDKEID ELIPKNRLKS1560
 1561 SSANSKIGSS APTTTAANTS LMGIKMTTVA LSSTSQTATA LTVPAISSAS THKTIKNPVN1620
 1621 NVRPGFPVSL PLAYPPPQFA HALLAAQTFQ QIRPPRLPMT HFGGTFPPAQ STWGPFPVRP1680
 1681 LSPARATNSP KPHMVPRHSN QNSSGSQVNS AGSLTSSPTT TTSSSASTVP GTSTNGSPSS1740
 1741 PSVRRQLFVT VVKTSNATTT TVTTTASNNN TAPTNATYPM PTAKEHYPVS SPSSPSPPAQ1800
 1801 PGGVSRNSPL DCGSASPNKV ASSSEQEAGS PPVVETTNTR PPNSSSSSGS SSAHSNQQQP1860
 1861 PGSVSQEPRP PLQQSQVPPP EVRMTVPPLA TSSAPVAVPS TAPVTYPMPQ TPMGCPQPTP1920
 1921 KMETPAIRPP PHGTTAPHKN SASVQNSSVA VLSVNHIKRP HSVPSSVQLP STLSTQSACQ1980
 1981 NSVHPANKPI APNFSAPLPF GPFSTLFENS PTSAHAFWGG SVVSSQSTPE SMLSGKSSYL2040
 2041 PNSDPLHQSD TSKAPGFRPP LQRPAPSPSG IVNMDSPYGS VTPSSTHLGN FASNISGGQM2100
 2101 YGPGAPLGGA PAAANFNRQH FSPLSLLTPC SSASNDSSAQ SVSSGVRAPS PAPSSVPLGS2160
 2161 EKPSNVSQDR KVPVPIGTER SARIRQTGTS APSVIGSNLS TSVGHSGIWS FEGIGGNQDK2220
 2221 VDWCNPGMGN PMIHRPMSDP GVFSQHQAME RDSTGIVTPS GTFHQHVPAG YMDFPKVGGM2280
 2281 PFSVYGNAMI PPVAPIPDGA GGPIFNGPHA ADPSWNSLIK MVSSSTENNG PQTVWTGPWA2340
 2341 PHMNSVHMNQ LG

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