YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37588848
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKHEQILVL DPPTDLKFKG PFTDVVTTNL KLRNPSDRKV CFKVKTTAPR RYCVRPNSGI  60
   61 IDPGSTVTVS VMLQPFDYDP NEKSKHKFMV QTIFAPPNTS DMEAVWKEAK PDELMDSKLR 120
  121 CVFEMPNEND KLGITPPGNA PTVTSMSSIN NTVATPASYH TKDDPRGLSV LKQEKQKNDM 180
  181 EPSKAVPLNA SKQDGPMPKP HSVSLNDTET RKLMEECKRL QGEMMKLSEE NRHLRDEGLR 240
  241 LRKVAHSDKP GSTSTASFRD NVTSPLPSLL VVIAAIFIGF FLGKFIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	263	0.76
Transmembrane Helix	264	286	0.86
Cytoplasmic	287	287	0.74