YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27597088, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGASAATP TALPYYVAFS QLLGLTLVAM TGAWLGLYRG GIAWESDLQF NAHPLCMVIG  60
   61 LIFLQGNALL VYRVFRNEAK RTTKVLHGLL HIFALVIALV GLVAVFDYHR KKGYADLYSL 120
  121 HSWCGILVFV LYFVQWLVGF SFFLFPGASF SLRSRYRPQH IFFGATIFLL SVGTALLGLK 180
  181 EALLFNLGGK YSAFEPEGVL ANVLGLLLAC FGGAVLYILT RADWKRPSQA EEQALSMDFK 240
  241 TLTEGDSPGS Q

Type	Start	End	Confidence
Cytoplasmic	1	14	0.90
Transmembrane Helix	15	37	0.89
Non-Cytoplasmic	38	51	0.87
Transmembrane Helix	52	75	0.87
Cytoplasmic	76	84	0.95
Transmembrane Helix	85	106	0.91
Non-Cytoplasmic	107	122	0.84
Transmembrane Helix	123	145	0.87
Cytoplasmic	146	159	0.80
Transmembrane Helix	160	179	0.95
Non-Cytoplasmic	180	198	0.88
Transmembrane Helix	199	220	0.94
Cytoplasmic	221	251	0.99