YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENSPTRT00000033809
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFDASLST YFKALLGPRD TRVKGWFLLD NYIPTFICSV IYLLIVWLGP KYMRNKQPFS  60
   61 CRGILVVYNL GLTLLSLYMF CELVTGVWEG KYNFFCQGTR TAGESDMKII RVLWWYYFSK 120
  121 LIEFMDTFFF ILRKNNHQIT VLHVYHHASM LNIWWFVMNW VPCGHSYFGA TLNSFIHVLM 180
  181 YSYYGLSSVP SMRPYLWWKK YITQGQLLQF VLTIIQTSCG VIWPCTFPLG WLYFQIGYMI 240
  241 SLIALFTNFY IQTYNKKGAS RRKDHLKDHQ NGSMAAVNGH TNSFSPLENN VKPRKLRKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	31	0.81
Transmembrane Helix	32	50	0.91
Cytoplasmic	51	63	0.69
Transmembrane Helix	64	85	0.84
Non-Cytoplasmic	86	112	0.82
Transmembrane Helix	113	132	0.67
Cytoplasmic	133	140	0.65
Transmembrane Helix	141	158	0.68
Non-Cytoplasmic	159	164	0.64
Transmembrane Helix	165	186	0.81
Cytoplasmic	187	205	0.76
Transmembrane Helix	206	226	0.91
Non-Cytoplasmic	227	231	0.79
Transmembrane Helix	232	253	0.90
Cytoplasmic	254	299	0.98