YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13623689, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSSVIQV FQQLGCAVID VDVMARHVVQ PGYPAHRRIV EVFGTEVLLE  60
   61 NGDINRKVLG DLIFNQPDRR QLLIAITHPE IRKEMMKETF KYFLRGYRYV ILDIPLLFET 120
  121 KKLLKYMKHT VVVYCDRDTQ LARLMRRNSL NRKDAEARIN AQLPLTDKAR MARHVLDNSG 180
  181 EWSVTKRQVI LLHTELERSL EYLPLRFGVL TGLAAIASLL YLLTHYLLPY A

Type	Start	End	Confidence
Cytoplasmic	1	204	0.82
Transmembrane Helix	205	227	0.87
Non-Cytoplasmic	228	231	0.74