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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HGNC:16392|MIM:6...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEEAFLRRR FSLCPPSSTP QKVDPRKLTR NLLLSGDNEL YPLSPGKDME PNGPSLPRDE  60
   61 GPPTPSSATK VPPAEYRLCN GSDKECVSPT ARVTKKETLK AQKENYRQEK KRATRQLLSA 120
  121 LTDPSVVIMA DSLKGPKGES VGSITQPLPS SYLIFRAASE SDGRCWLDAL ELALRCSSLL 180
  181 RLGTCKPGRD GEPGTSPDAS PSSLCGLPAS ATVHPDQDLF PLNGSSLEND AFSDKSEREN 240
  241 PEESDTETQD HSRKTESGSD QSETPGAPVR RGTTYVEQVQ EELGELGEAS QVETVSEENK 300
  301 SLMWTLLKQL RPGMDLSRVV LPTFVLEPRS FLNKLSDYYY HADLLSRAAV EEDAYSRMKL 360
  361 VLRWYLSGFY KKPKGIKKPY NPILGETFRC CWFHPQTDSR TFYIAEQVSH HPPVSAFHVS 420
  421 NRKDGFCISG SITAKSRFYG NSLSALLDGK ATLTFLNRAE DYTLTMPYAH CKGILYGTMT 480
  481 LELGGKVTIE CAKNNFQAQL EFKLKPFFGG STSINQISGK ITSGEEVLAS LSGHWDRDVF 540
  541 IKEEGSGSSA LFWTPSGEVR RQRLRQHTVP LEEQTELESE RLWQHVTRAI SKGDQHRATQ 600
  601 EKFALEEAQR QRARERQESL MPWKPQLFHL DPITQEWHYR YEDHSPWDPL KDIAQFEQDG 660
  661 ILRTLQQEAV ARQTTFLGSP GPRHERSGPD QRLRKASDQP SGHSQATESS GSTPESCPEL 720
  721 SDEEQDGDFV PGGESPCPRC RKEARRLQAL HEAILSIREA QQELHRHLSA MLSSTARAAQ 780
  781 APTPGLLQSP RSWFLLCVFL ACQLFINHIL K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle