YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZRAS_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFMQRSKDS LAKWLSAILP VVIVGLVGLF AVTVIRDYGR ASEADRQALL EKGNVLIRAL  60
   61 ESGSRVGMGM RMHHVQQQAL LEEMAGQPGV LWFAVTDAQG IIILHSDPDK VGRALYSPDE 120
  121 MQKLKPEENS RWRLLGKTET TPALEVYRLF QPMSAPWRHG MHNMPRCNGK AVPQVDAQQA 180
  181 IFIAVDASDL VATQSGEKRN TLIILFALAT VLLASVLSFF WYRRYLRSRQ LLQDEMKRKE 240
  241 KLVALGHLAA GVAHEIRNPL SSIKGLAKYF AERAPAGGEA HQLAQVMAKE ADRLNRVVSE 300
  301 LLELVKPTHL ALQAVDLNTL INHSLQLVSQ DANSREIQLR FTANDTLPEI QADPDRLTQV 360
  361 LLNLYLNAIQ AIGQHGVISV TASESGAGVK ISVTDSGKGI AADQLDAIFT PYFTTKAEGT 420
  421 GLGLAVVHNI VEQHGGTIQV ASQEGKGSTF TLWLPVNITR KDPQG

Type	Start	End	Confidence
Cytoplasmic	1	10	0.74
Transmembrane Helix	11	34	0.80
Non-Cytoplasmic	35	201	0.63
Transmembrane Helix	202	222	0.96
Cytoplasmic	223	465	0.48