YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|479966
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLRPSIWLC FPLCLALPGQ SQPKAADDLG GLYCGPSSFH FSINLLSQDT ATPPALVVWD  60
   61 RRGRLHKLQN DSGCGTWVHK GPGSSMGVEA SYRGCYVTEW DSHYLMPIGL EEADAGGHRT 120
  121 VTETKLFKCP VDFLALDVPT IGLCDAVPVW DRLPCAPPPI TQGECKQLGC CYNSEEVPSC 180
  181 YYGNTVTSRC TQDGHFSIAV SRNVTSPPLL WDSVHLAFRN DSECKPVMET HTFVLFRFPF 240
  241 SSCGTAKRVT GNQAVYENEL VAARDVRTWS HGSITRDSIF RLRVSCIYSV SSSALPVNIQ 300
  301 VFTLPPPLPE THPGPLTLEL QIAKDERYGS YYNASDYPVV KLLREPIYVE VSIRHRTDPS 360
  361 LGLHLHQCWA TPGMSPLLQP QWPMLVNGCP YTGDNYQTKL IPVQKASNLL FPSHYQRFSV 420
  421 STFSFVDSVA KQALKGPVYL HCTASVCKPA GAPICVTTCP AARRRRSSDI HFQNGTASIS 480
  481 SKGPMILLQA TRDSSERLHK YSRPPVDSHA LWVAGLLGSL IIGALLVSYL VFRKWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle