YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZIPA_YERPY
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQDLRLILI VVGAIAIIAL LLHGLWTSRK ERSSLFRDRP VKRTKQERVE TPIESLDEGV  60
   61 GEVRVRTSHP QEKPSFNHLD DDDDEVPVIQ HAETKSAQVK TASRQAPFAS VQTDYDDPLL 120
  121 GGLSAEQPPH DLSRDPLLGK ADESYSQPQH AEPPHVEKPA HQVAPQQHVE SQQEPVAPAP 180
  181 EAKPQKLKET VLVLHVAAHH GGVIGGEVLL QSVLQSGFQF GEMGIFHRHL SPAGSGPVLF 240
  241 SLANMVKPGS FDPDTMSDFS TPGVSMFMMV PSYGDANQNF KLMLQSAQRI ADDVGGVVLD 300
  301 DERRMMTPQK LESYKARIRE VLDANTIA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.79
Transmembrane Helix	7	27	0.94
Non-Cytoplasmic	28	328	0.86