YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZIPA_PSEPK
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIGLREWLI LIGIIVIAGI LFDGWRRMRG GKGKLKFRLD RSYSNLPDEE GGSAEVLGPS  60
   61 RVLDTHKEPE LDESDLPSLS ASARDREREP KPVKASKRGK RASAAADVHQ GDLNLSAEPR 120
  121 EPDLFSDSDD DFAADNNRSS GAAPASNSVK ELPPAEEVLV ISVISRDEGG FKGPALLQNI 180
  181 LESGLRFGEM DIFHRHESMA GHGEVLFSMA NAVKPGVFDL DDIDHFSTRA VSFFLGLPGP 240
  241 RHPKQAFDVM VAAARKLAHE LNGELKDDQR SVLTAQTIEH YRQRIVEFER RALTQKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.75
Transmembrane Helix	8	26	0.94
Cytoplasmic	27	297	0.82