YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZFPL1_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKKK VTNLFCFKHR VNVCEHCLVS NHNKCIVQSY LQWLQDSDYN PNCSLCIQPL  60
   61 DSQDTVRLVC YDLFHWSCLN ELASHQPLNT APDGYQCPTC QGPVFPPRNL ASPVADMLRE 120
  121 QLSSVNWARA GLGLPLIEDP EEEETTTHSG TSFSEWSTFE TTSVDVSMSN PTLTSLPPHQ 180
  181 DGEHIYNNRE QSAPNNTVFN MVTTSATDTV TISTVTSPRK LYDTRDLGHS AVMQIDFDDD 240
  241 KYRRRPALNW FAQVLKNCTS TKKKTLALKH RIFLLLLFGV IGFFTLIIIM AKFGRASAET 300
  301 DPNLDPLLNP NIRIGNM

Type	Start	End	Confidence
Cytoplasmic	1	271	0.89
Transmembrane Helix	272	293	0.93
Non-Cytoplasmic	294	317	0.88