YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15832287, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTLNIIWQ YLRAFVLIYA CLYAGIFIAS LLPVTIPGSI IGMLILFVLL ALQILPAKWV  60
   61 NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AISTLVVFLV VSWSSQLVHG 120
  121 ERKVVGQKGS EE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.96
Transmembrane Helix	9	31	0.87
Non-Cytoplasmic	32	35	0.71
Transmembrane Helix	36	57	0.88
Cytoplasmic	58	65	0.84
Transmembrane Helix	66	86	0.93
Non-Cytoplasmic	87	92	0.81
Transmembrane Helix	93	113	0.94
Cytoplasmic	114	132	0.91