YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YMF19_RAPSA
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIQSKDP  60
   61 NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK ITLISCFGEI SGSRGMERNI 120
  121 LYNISKSSPS NTGRWITCRN CRNDIMLIHA VHGQGSIK

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.50
Transmembrane Helix	9	34	0.74
Cytoplasmic	35	158	0.53