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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RNY_CLOAB
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNTNKLIIT IVCLVIIITI VEMYIRRKYA WAKISKAEED AKKIKEDAKR EAETLKKEAT  60
   61 LEAKEEAHRL RSDLDKETRE RRNEIQRLER RNLQREETLD KKNDLLEKRE NGLNERENSI 120
  121 QERQNTIEQL YKEEREKLEQ LSGLTSEEAK NLLLEEVNRE IKHEKSIMIK EVEQKAKEEA 180
  181 DKKAREIITY AIQRCAADHV AESTVYVVSL PNDEMKGRII GREGRNIRAI ETLTGVDLII 240
  241 DDTPEAVILS GFDPVRREVA KVALEKLILD GRIHPARIEE MVEKAKKEVE NNIKEEGEQA 300
  301 TFETGVHGLH SELTRLLGRL KYRTSYGQNV LKHSIEVSYL AGFMAAELGI DPTFAKRAGL 360
  361 LHDIGKAVDH EVEGPHALIG AEVSKKYHEL PLIVNAIGAH HGDVEPQSLE AILVQAADAI 420
  421 SAARPGARRE TLEAYIKRLE KLEEIANSYE GVEKSYAIQA GREIRIMVKP ETVDDAGSIE 480
  481 MARGIVKKIE EQLEYPGQIK VNVIRETRAV EYAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle